orange1.1g002062m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g002062m.g T181612_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g002062m FAR1 210 297

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N
LBD40 Arabidopsis thaliana AT1G67100 N
LBD42 Arabidopsis thaliana AT1G68510 N
LBD41 Arabidopsis thaliana AT3G02550 N
Bostr.1460s0172 Boechera stricta Bostr.1460s0172 N
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N
Bo1g156310 Brassica oleracea Bo1g156310 N
Bo2g055410 Brassica oleracea Bo2g055410 N
Bo3g055690 Brassica oleracea Bo3g055690 N
Bo6g106960 Brassica oleracea Bo6g106960 N
Bra004315 Brassica rapa Bra004315 N
Bra021433 Brassica rapa Bra021433 N
PK03169.1 Cannabis sativa PK03169.1 N
PK04548.1 Cannabis sativa PK04548.1 N
PK04625.1 Cannabis sativa PK04625.1 N
Cagra.1194s0049 Capsella grandiflora Cagra.1194s0049 N
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N
Carubv10000015m.g Capsella rubella Carubv10000015m.g N
Carubv10002654m.g Capsella rubella Carubv10002654m.g N
Carubv10015363m.g Capsella rubella Carubv10015363m.g N
Carubv10021721m.g Capsella rubella Carubv10021721m.g N
Carubv10022391m.g Capsella rubella Carubv10022391m.g N
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N
Cla007208 Citrullus lanatus Cla007208 N
Cla019264 Citrullus lanatus Cla019264 N
Cla020705 Citrullus lanatus Cla020705 N
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N
Cucsa.031350 Cucumis sativus Cucsa.031350 N
Cucsa.199060 Cucumis sativus Cucsa.199060 N
Cucsa.283560 Cucumis sativus Cucsa.283560 N
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N
GLYMA08G31143 Glycine max GLYMA08G31143 N
GLYMA08G48040 Glycine max GLYMA08G48040 N
GLYMA13G07590 Glycine max GLYMA13G07590 N
GLYMA18G53440 Glycine max GLYMA18G53440 N
GLYMA19G06280 Glycine max GLYMA19G06280 N
GLYMA20G24950 Glycine max GLYMA20G24950 N
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N
MLOC_58304 Hordeum vulgare MLOC_58304 N
LPERR01G01830 Leersia perrieri LPERR01G01830 N
LPERR01G15290 Leersia perrieri LPERR01G15290 N
Lus10028470.g Linum usitatissimum Lus10028470.g N
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N
MDP0000136037 Malus domestica MDP0000136037 N
MDP0000233303 Malus domestica MDP0000233303 N
cassava38982.m1 Manihot esculenta cassava38982.m1 N
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N
MTR_6g018270 Medicago truncatula MTR_6g018270 N
MTR_7g007010 Medicago truncatula MTR_7g007010 N
mgf010898m Mimulus guttatus mgf010898m N
mgf011656m Mimulus guttatus mgf011656m N
mgf017960m Mimulus guttatus mgf017960m N
mgf021653m Mimulus guttatus mgf021653m N
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N
OBART01G01940 Oryza barthii OBART01G01940 N
OBART01G17510 Oryza barthii OBART01G17510 N
OB01G11830 Oryza brachyantha OB01G11830 N
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N
BGIOSGA001546 Oryza indica BGIOSGA001546 N
BGIOSGA002703 Oryza indica BGIOSGA002703 N
OMERI01G01380 Oryza meridionalis OMERI01G01380 N
OMERI01G16320 Oryza meridionalis OMERI01G16320 N
ONIVA01G02110 Oryza nivara ONIVA01G02110 N
ONIVA01G19320 Oryza nivara ONIVA01G19320 N
OPUNC01G01670 Oryza punctata OPUNC01G01670 N
OPUNC01G18000 Oryza punctata OPUNC01G18000 N
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N
OS01G0511000 Oryza sativa OS01G0511000 N
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N
Pavir.J00526 Panicum virgatum Pavir.J00526 N
Pavir.J01483 Panicum virgatum Pavir.J01483 N
Pavir.J11724 Panicum virgatum Pavir.J11724 N
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N
Pm029059 Prunus mume Pm029059 N
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N
27524.m000293 Ricinus communis 27524.m000293 N
28207.m000107 Ricinus communis 28207.m000107 N
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N
Si002412m.g Setaria italica Si002412m.g N
Si022660m.g Setaria italica Si022660m.g N
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N
Sb01g032580 Sorghum bicolor Sb01g032580 N
Sb03g007270 Sorghum bicolor Sb03g007270 N
Sb09g025710 Sorghum bicolor Sb09g025710 N
Sb09g030780 Sorghum bicolor Sb09g030780 N
TCM_009888 Theobroma cacao TCM_009888 N
TCM_012338 Theobroma cacao TCM_012338 N
TCM_019459 Theobroma cacao TCM_019459 N
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N
Traes_2BL_3A840DB921 Triticum aestivum Traes_2BL_3A840DB921 N
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N
AC234149.1_FG002 Zea mays AC234149.1_FG002 N
GRMZM2G060544 Zea mays GRMZM2G060544 N
GRMZM2G073044 Zea mays GRMZM2G073044 N
GRMZM2G132693 Zea mays GRMZM2G132693 N
GRMZM2G386674 Zea mays GRMZM2G386674 N