CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si016508m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si016508m.g
T201502_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si016508m
GRAS
337
696
LLDELAAAAKAAEAGNSVGAREILARLNHQLPPLGKPFLRSASYLKEALLLALAEGHHGACRLTSPLDVALKLAAYKSFSDLSPVLQFTNFTATQALLDEIAGSTAACIHVIDFDLGVGGQWASFLQELAHRRGAGGAALPFVKLTAFVSTASHHPLELRLTRDNIAQFAADLGIPFEFNAVSADTINPAELISTTGDEVVAVVLPVGCSARAPPLPAILRLVKQLGPKIVIAIDHGGDRADLPFSQHFLNCFQSCVFLLDSLDAAGIDPDSAFKIEKFLIQPRIEDMVLGRGKADKPMAWRSAFAAGGFAPVPPSNLADAQADCLLKRVQVRGFHVEKCGVGLTLYWQRGELVTVSAWR
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_3741
Arabidopsis lyrata
Al_scaffold_0007_3741
I
0.000
scaffold_704060.1
Arabidopsis lyrata
scaffold_704060.1
I
0.000
fgenesh2_kg.7__3412__AT5G41200.1
Arabidopsis lyrata
fgenesh2_kg.7__3412__AT5G41200.1
I
0.000
AT5G26865
Arabidopsis thaliana
AT5G26865
N
0.000
AGL105
Arabidopsis thaliana
AT5G37415
I
0.000
AGL77
Arabidopsis thaliana
AT5G38740
I
0.000
AGL81
Arabidopsis thaliana
AT5G39750
I
0.000
AGL98
Arabidopsis thaliana
AT5G39810
I
0.000
AGL76
Arabidopsis thaliana
AT5G40120
I
0.000
AGL43
Arabidopsis thaliana
AT5G40220
I
0.000
AGL75
Arabidopsis thaliana
AT5G41200
I
0.000
Bostr.3751s0031
Boechera stricta
Bostr.3751s0031
I
0.000
Bostr.3751s0030
Boechera stricta
Bostr.3751s0030
I
0.000
Bostr.10058s0014
Boechera stricta
Bostr.10058s0014
I
0.000
Bostr.0568s0255
Boechera stricta
Bostr.0568s0255
I
0.000
Bo4g139640
Brassica oleracea
Bo4g139640
N
0.000
Bo4g139620
Brassica oleracea
Bo4g139620
N
0.000
Bo4g139560
Brassica oleracea
Bo4g139560
N
0.000
Bo4g139260
Brassica oleracea
Bo4g139260
I
0.000
Bo00615s090
Brassica oleracea
Bo00615s090
I
0.000
Bra025619
Brassica rapa
Bra025619
N
0.000
Bra031864
Brassica rapa
Bra031864
I
0.000
Bra025609
Brassica rapa
Bra025609
I
0.000
Bra025607
Brassica rapa
Bra025607
N
0.000
Thhalv10005313m.g
Eutrema salsugineum
Thhalv10005313m.g
I
0.000
Thhalv10028282m.g
Eutrema salsugineum
Thhalv10028282m.g
I
0.000