CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10024384.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10024384.g
T202747_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10024384
GRAS
146
517
LRTLLITCAQAVAADDGTSASELLKQIRLHSSPFGDANQRLANCFADGLEARLAGTGSQIYKGLVDKKTCAADVLKAYHLFLAACPFKKLSNFVSNKTIRTVSGDATKVHVIDFGVLYGFQWPTLIQRMSWRPGGPPKLRVTGIDFPQPGFRPAERVEATGRRLAAYAEKFKVPFEYNAIAKRWENVQLEDLKIEKDEFVIVNCLYRAKNLLDETVCVDSPRKIVLGLIKRINPRLFIHGVINGAFNAPFFVTRFREALFHFSAMFDMLETVVPREDQERMLIEKEIFGREALNVIACEGWERVERPETYKQWQVRCLRAGFEQLHWDKETMKEANKKAKELYHKDFLIDEDNKWLLQGWKGRIIYALSMWK
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.708
SCL9
Arabidopsis thaliana
AT2G37650
N
0.704
Bo3g031890
Brassica oleracea
Bo3g031890
N
0.700
Bra000012
Brassica rapa
Bra000012
N
0.703
PK20526.1
Cannabis sativa
PK20526.1
N
0.741
Cagra.18121s0006
Capsella grandiflora
Cagra.18121s0006
N
0.701
Carubv10025657m.g
Capsella rubella
Carubv10025657m.g
N
0.701
Ca_21138
Cicer arietinum
Ca_21138
N
0.741
Cla018179
Citrullus lanatus
Cla018179
N
0.759
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.708
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.762
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.762
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.708
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.762
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.757
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.804
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.749
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.729
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.734
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.705
Gorai.007G376400
Gossypium raimondii
Gorai.007G376400
N
0.738
Lus10010845.g
Linum usitatissimum
Lus10010845.g
N
0.766
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.751
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.743
mgf011165m
Mimulus guttatus
mgf011165m
N
0.716
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.781
Pm002685
Prunus mume
Pm002685
N
0.781
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.778
29767.m000200
Ricinus communis
29767.m000200
N
0.756
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.795
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.703
Solyc09g010920.1
Solanum lycopersicum
Solyc09g010920.1
N
0.714
Solyc10g086530.1
Solanum lycopersicum
Solyc10g086530.1
N
0.724
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.741
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.716
TCM_021920
Theobroma cacao
TCM_021920
N
0.762
TCM_042705
Theobroma cacao
TCM_042705
N
0.710
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.741