Pavir.J28748 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J28748 T203081_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J28748.1.p GRAS 77 439

Links

Other GRAS family TFs
Other Panicum virgatum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32974 Aegilops tauschii F775_32974 N 0.809
BRADI4G03867 Brachypodium distachyon BRADI4G03867 N 0.833
MLOC_21297 Hordeum vulgare MLOC_21297 N 0.825
LPERR11G20420 Leersia perrieri LPERR11G20420 N 0.706
LPERR12G13750 Leersia perrieri LPERR12G13750 N 0.723
OBART12G16530 Oryza barthii OBART12G16530 N 0.857
OB12G23410 Oryza brachyantha OB12G23410 N 0.846
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.857
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.857
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.857
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.857
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.863
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.857
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.857
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.854
OS12G0573200 Oryza sativa OS12G0573200 N 0.857
Pavir.J38998 Panicum virgatum Pavir.J38998 N 0.809
Pavir.J10950 Panicum virgatum Pavir.J10950 N 0.947
Pavir.J08330 Panicum virgatum Pavir.J08330 N 0.809
Pavir.Hb00044 Panicum virgatum Pavir.Hb00044 N 0.706
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.884
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.825
Traes_5BS_ED54C58C5 Triticum aestivum Traes_5BS_ED54C58C5 N 0.811
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.789
Traes_5DS_C06FE6037 Triticum aestivum Traes_5DS_C06FE6037 N 0.809
TRAES3BF026400020CFD_g Triticum aestivum TRAES3BF026400020CFD_g N 0.737
TRIUR3_22881 Triticum urartu TRIUR3_22881 N 0.729
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.879
GRMZM2G179325 Zea mays GRMZM2G179325 N 0.911