CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK17372.1
(
Cannabis sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
PK17372.1
T203248_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK17372.1
GRAS
84
281
LLTLLLQCAEAVSADNFDDANKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAAMPSVGVPQNHSQRMASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGNSMEALEATGKRLTDFADKLGLPFEFFPVADKVGNLDPERLNVSKREAVA
Links
Other
GRAS
family TFs
Other
Cannabis sativa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
0.854
SCR
Arabidopsis thaliana
AT3G54220
N
0.854
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
0.854
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
0.854
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
0.854
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
0.879
Ca_09530
Cicer arietinum
Ca_09530
N
0.848
Cla012346
Citrullus lanatus
Cla012346
N
0.899
GLYMA18G45220
Glycine max
GLYMA18G45220
N
0.859
LPERR11G01210
Leersia perrieri
LPERR11G01210
N
0.714
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
0.874
mgf012242m
Mimulus guttatus
mgf012242m
N
0.859
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
0.798
ORGLA12G0010300
Oryza glaberrima
ORGLA12G0010300
N
0.709
ORGLA11G0013300
Oryza glaberrima
ORGLA11G0013300
N
0.716
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
0.763
Pavir.J23622
Panicum virgatum
Pavir.J23622
N
0.783
TCM_017746
Theobroma cacao
TCM_017746
N
0.768
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
0.803
GRMZM2G015080
Zea mays
GRMZM2G015080
N
0.713