CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE04386
(
Caenorhabditis remanei
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CRE04386
T206214_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE04386
Homeodomain
89
142
PKRFTKLQLSILKARFSKCALVNEQERIDLGKEIGLSPNQVMWWFARQRTNRKR
CRE04386
Homeodomain
150
200
SKTGTFTKFQLAILNKEFSKCPRISHGKKVELAKITGLTETQIQNWFRRQN
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis remanei
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK09859.1
Cannabis sativa
PK09859.1
N
Ca_08777
Cicer arietinum
Ca_08777
N
Cla019540
Citrullus lanatus
Cla019540
N
Ciclev10031305m.g
Citrus clementina
Ciclev10031305m.g
N
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
orange1.1g037028m.g
Citrus sinensis
orange1.1g037028m.g
N
Cucsa.196250
Cucumis sativus
Cucsa.196250
N
Eucgr.H04688
Eucalyptus grandis
Eucgr.H04688
N
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
GLYMA17G13680
Glycine max
GLYMA17G13680
N
GLYMA05G03020
Glycine max
GLYMA05G03020
N
Gorai.006G270800
Gossypium raimondii
Gorai.006G270800
N
Lus10037055.g
Linum usitatissimum
Lus10037055.g
N
Lus10036932.g
Linum usitatissimum
Lus10036932.g
N
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
MTR_4g104020
Medicago truncatula
MTR_4g104020
N
mgf020930m
Mimulus guttatus
mgf020930m
N
Pavir.J35085
Panicum virgatum
Pavir.J35085
N
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
Pm006846
Prunus mume
Pm006846
N
Pm024459
Prunus mume
Pm024459
N
PRUPE_ppa026722mg
Prunus persica
PRUPE_ppa026722mg
N
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
30147.m013794
Ricinus communis
30147.m013794
N
29929.m004746
Ricinus communis
29929.m004746
N
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
TCM_010708
Theobroma cacao
TCM_010708
N
TCM_014574
Theobroma cacao
TCM_014574
N
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N