CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf012660m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf012660m
T227710_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT
AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.844
0.807
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN
NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.803
0.860
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.803
0.860
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.803
0.860
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.801
0.860
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.801
0.860
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.773
0.684
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.773
0.684
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.750
0.825
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.750
0.825
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV
BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.750
0.825
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf012660m
Homeodomain
150
206
ARKKLRLSKDQSATLEESFKEHNTLNPKQKMALAKRLGLRPRQVEVWFQNRRARTKL
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
695 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI086517
Acyrthosiphon pisum
ACYPI086517
N
0.000
F775_10961
Aegilops tauschii
F775_10961
N
0.000
Alligator_sinensis_CCG004967.1
Alligator sinensis
Alligator_sinensis_CCG004967.1
N
0.000
M378DRAFT_56764
Amanita muscaria
M378DRAFT_56764
N
0.000
ANCCAN_27026
Ancylostoma caninum
ANCCAN_27026
N
0.000
ANCCEY_10891
Ancylostoma ceylanicum
ANCCEY_10891
N
0.000
ACAC_0000093601
Angiostrongylus cantonensis
ACAC_0000093601
N
0.000
ACOC_0000334101
Angiostrongylus costaricensis
ACOC_0000334101
N
0.000
ASIM_0000060401
Anisakis simplex
ASIM_0000060401
N
0.000
ASIM_0001450801
Anisakis simplex
ASIM_0001450801
N
0.000
ENSACAG00000000961
Anolis carolinensis
ENSACAG00000000961
N
0.000
ENSACAG00000005787
Anolis carolinensis
ENSACAG00000005787
N
0.000
ENSACAG00000027662
Anolis carolinensis
ENSACAG00000027662
I
0.000
AALB008451
Anopheles albimanus
AALB008451
N
0.000
AARA004444
Anopheles arabiensis
AARA004444
N
0.000
ACHR008505
Anopheles christyi
ACHR008505
N
0.000
ACUA011088
Anopheles culicifacies
ACUA011088
N
0.000
ACUA020431
Anopheles culicifacies
ACUA020431
N
0.000
ADIR006385
Anopheles dirus
ADIR006385
N
0.000
AEPI002733
Anopheles epiroticus
AEPI002733
N
0.000
AEPI010384
Anopheles epiroticus
AEPI010384
N
0.000
AEPI010666
Anopheles epiroticus
AEPI010666
N
0.000
AFAF006159
Anopheles farauti
AFAF006159
I
0.000
AFUN002980
Anopheles funestus
AFUN002980
N
0.000
AMAM008009
Anopheles maculatus
AMAM008009
N
0.000
AMEM011598
Anopheles merus
AMEM011598
N
0.000
AMIN002696
Anopheles minimus
AMIN002696
N
0.000
AMIN006246
Anopheles minimus
AMIN006246
N
0.000
AQUA009533
Anopheles quadriannulatus
AQUA009533
N
0.000
AQUA015309
Anopheles quadriannulatus
AQUA015309
N
0.000
ASTEI00742
Anopheles stephensi
ASTEI00742
N
0.000
ACEP22770
Atta cephalotes
ACEP22770
N
0.000
BGLB006778
Biomphalaria glabrata
BGLB006778
N
0.000
BGIBMGA010052
Bombyx mori
BGIBMGA010052
N
0.000
BRADI2G50510
Brachypodium distachyon
BRADI2G50510
N
0.000
BRADI3G23370
Brachypodium distachyon
BRADI3G23370
N
0.000
Bo1g131210
Brassica oleracea
Bo1g131210
N
0.000
Bm8478
Brugia malayi
Bm8478
N
0.000
BTMF_0001416601
Brugia timori
BTMF_0001416601
N
0.000
CJA40511
Caenorhabditis japonica
CJA40511
I
0.000
ENSCJAG00000004205
Callithrix jacchus
ENSCJAG00000004205
I
0.000
NKX6-3
Canis familiaris
ENSCAFG00000005710
N
0.000
Carubv10007218m.g
Capsella rubella
Carubv10007218m.g
N
0.000
Cmyd_10007464
Chelonia mydas
Cmyd_10007464
I
0.000
Ca_08015
Cicer arietinum
Ca_08015
N
0.000
Ca_19697
Cicer arietinum
Ca_19697
N
0.000
CLEC002615
Cimex lectularius
CLEC002615
N
0.000
CLEC004114
Cimex lectularius
CLEC004114
N
0.000
csin109617
Clonorchis sinensis
csin109617
N
0.000
CpipJ_CPIJ001378
Culex pipiens
CpipJ_CPIJ001378
N
0.000
CPIJ001378
Culex quinquefasciatus
CPIJ001378
N
0.000
KGM_17085
Danaus plexippus
KGM_17085
N
0.000
tlx2
Danio rerio
ENSDARG00000011273
I
0.000
YQE_10731
Dendroctonus ponderosae
YQE_10731
N
0.000
YQE_12889
Dendroctonus ponderosae
YQE_12889
N
0.000
DICVIV_02944
Dictyocaulus viviparus
DICVIV_02944
N
0.000
nDi.2.2.2.g10664
Dirofilaria immitis
nDi.2.2.2.g10664
I
0.000
GI23625
Drosophila mojavensis
FBgn0146351
N
0.000
ECPE_0000357901
Echinostoma caproni
ECPE_0000357901
N
0.000
EEL_0000533501
Elaeophora elaphi
EEL_0000533501
N
0.000
gene23926-v1.0-hybrid
Fragaria vesca
gene23926-v1.0-hybrid
N
0.000
gene25833-v1.0-hybrid
Fragaria vesca
gene25833-v1.0-hybrid
N
0.000
GLYMA08G09430
Glycine max
GLYMA08G09430
N
0.000
GPUH_0000797801
Gongylonema pulchrum
GPUH_0000797801
N
0.000
Gorai.003G184900
Gossypium raimondii
Gorai.003G184900
I
0.000
HHAL004742-PA
Halyomorpha halys
HHAL004742-PA
N
0.000
HMEL006102
Heliconius melpomene
HMEL006102
N
0.000
HelroG192586
Helobdella robusta
HelroG192586
N
0.000
NKX6-1
Homo sapiens
ENSG00000163623
D
0.000
NKX6-3
Homo sapiens
ENSG00000165066
D
0.000
ISCW010454
Ixodes scapularis
ISCW010454
N
0.000
ISCW012145
Ixodes scapularis
ISCW012145
N
0.000
K443DRAFT_111002
Laccaria amethystina
K443DRAFT_111002
N
0.000
LACBIDRAFT_243459
Laccaria bicolor
LACBIDRAFT_243459
N
0.000
LDEC009173
Leptinotarsa decemlineata
LDEC009173
N
0.000
LDEC016573
Leptinotarsa decemlineata
LDEC016573
N
0.000
LDEC017208
Leptinotarsa decemlineata
LDEC017208
N
0.000
LOAG_07462
Loa loa
LOAG_07462
N
0.000
LjT36I04.40.nd
Lotus japonicus
LjT36I04.40.nd
N
0.000
VAX1
Loxodonta africana
ENSLAFG00000018107
N
0.000
LCUP008695
Lucilia cuprina
LCUP008695
N
0.000
ENSMMUG00000014725
Macaca mulatta
ENSMMUG00000014725
N
0.000
ENSMEUG00000015794
Macropus eugenii
ENSMEUG00000015794
I
0.000
MDP0000690933
Malus domestica
MDP0000690933
N
0.000
cassava13400.valid.m1
Manihot esculenta
cassava13400.valid.m1
N
0.000
MESCA006388
Megaselia scalaris
MESCA006388
N
0.000
MCINX004708
Melitaea cinxia
MCINX004708
N
0.000
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
N
0.000
maker-nMf.1.1.scaf28435-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf28435-augustus-gene-0.3
N
0.000
Minc02159
Meloidogyne incognita
Minc02159
N
0.000
mgf006959m
Mimulus guttatus
mgf006959m
N
0.000
GSMUA_Achr3G23090_001
Musa acuminata
GSMUA_Achr3G23090_001
N
0.000
Tlx1
Mus musculus
ENSMUSG00000025215
I
0.000
NEMVEDRAFT_v1g225956
Nematostella vectensis
NEMVEDRAFT_v1g225956
N
0.000
Ocbimv22024994m.g
Octopus bimaculoides
Ocbimv22024994m.g
N
0.000
SNAPOd2T00015975001
Oikopleura dioica
SNAPOd2T00015975001
N
0.000
ENSOANG00000003475
Ornithorhynchus anatinus
ENSOANG00000003475
I
0.000
EMX1
Oryctolagus cuniculus
ENSOCUG00000008208
N
0.000
ENSOCUG00000013528
Oryctolagus cuniculus
ENSOCUG00000013528
I
0.000
OLONG_008306
Oryza longistaminata
OLONG_008306
N
0.000
OLONG_012459
Oryza longistaminata
OLONG_012459
N
0.000
OLONG_017944
Oryza longistaminata
OLONG_017944
N
0.000
OMERI08G08060
Oryza meridionalis
OMERI08G08060
N
0.000
ENSOARG00000003161
Ovis aries
ENSOARG00000003161
I
0.000
ENSOARG00000010209
Ovis aries
ENSOARG00000010209
N
0.000
Pavir.Fa02028
Panicum virgatum
Pavir.Fa02028
N
0.000
ENSPTRG00000017522
Pan troglodytes
ENSPTRG00000017522
N
0.000
ENSPANG00000014739
Papio anubis
ENSPANG00000014739
N
0.000
PHUM118950
Pediculus humanus
PHUM118950
N
0.000
PHUM359880
Pediculus humanus
PHUM359880
N
0.000
PHUM359910
Pediculus humanus
PHUM359910
N
0.000
PPAI004705
Phlebotomus papatasi
PPAI004705
N
0.000
PPAI006607
Phlebotomus papatasi
PPAI006607
I
0.000
PPAI007203
Phlebotomus papatasi
PPAI007203
N
0.000
PDK_20s1347391g002
Phoenix dactylifera
PDK_20s1347391g002
N
0.000
PDK_20s1410161g001
Phoenix dactylifera
PDK_20s1410161g001
N
0.000
ENSPPYG00000018545
Pongo abelii
ENSPPYG00000018545
N
0.000
POPTR_0012s03550
Populus trichocarpa
POPTR_0012s03550
N
0.000
scaffold61-EXSNAP2012.75
Pristionchus exspectatus
scaffold61-EXSNAP2012.75
N
0.000
PPA04715
Pristionchus pacificus
PPA04715
N
0.000
PPA28666
Pristionchus pacificus
PPA28666
N
0.000
ENSPCAG00000005898
Procavia capensis
ENSPCAG00000005898
N
0.000
PXEA_0003635301
Protopolystoma xenopodis
PXEA_0003635301
N
0.000
ENSPVAG00000007998
Pteropus vampyrus
ENSPVAG00000007998
N
0.000
RPRC003713
Rhodnius prolixus
RPRC003713
N
0.000
nRc.2.0.1.g08298
Romanomermis culicivorax
nRc.2.0.1.g08298
N
0.000
nRc.2.0.1.g21365
Romanomermis culicivorax
nRc.2.0.1.g21365
N
0.000
ENSSHAG00000009294
Sarcophilus harrisii
ENSSHAG00000009294
I
0.000
ENSSHAG00000011988
Sarcophilus harrisii
ENSSHAG00000011988
I
0.000
A_05714
Schistosoma haematobium
A_05714
N
0.000
Sjc_0085440
Schistosoma japonicum
Sjc_0085440
N
0.000
SMRZ_0000903001
Schistosoma margrebowiei
SMRZ_0000903001
N
0.000
SMTD_0001030501
Schistosoma mattheei
SMTD_0001030501
N
0.000
SROB_0001009601
Schistosoma rodhaini
SROB_0001009601
N
0.000
SMU15011671
Schmidtea mediterranea
SMU15011671
I
0.000
PGSC0003DMG400007775
Solanum tuberosum
PGSC0003DMG400007775
N
0.000
PGSC0003DMG400013263
Solanum tuberosum
PGSC0003DMG400013263
N
0.000
PGSC0003DMG400019030
Solanum tuberosum
PGSC0003DMG400019030
N
0.000
SINV22981
Solenopsis invicta
SINV22981
N
0.000
SPER_0001142801
Spirometra erinaceieuropaei
SPER_0001142801
I
0.000
SPER_0001728701
Spirometra erinaceieuropaei
SPER_0001728701
N
0.000
SPU_022574
Strongylocentrotus purpuratus
SPU_022574
N
0.000
VAX2
Sus scrofa
ENSSSCG00000008318
N
0.000
TLX3
Taeniopygia guttata
ENSTGUG00000014966
N
0.000
ENSTRUG00000017602
Takifugu rubripes
ENSTRUG00000017602
N
0.000
ENSTNIG00000016273
Tetraodon nigroviridis
ENSTNIG00000016273
I
0.000
TCLT_0000655201
Thelazia callipaeda
TCLT_0000655201
I
0.000
TCM_016582
Theobroma cacao
TCM_016582
I
0.000
TCNE_0000505101
Toxocara canis
TCNE_0000505101
N
0.000
TRE_0000385401
Trichobilharzia regenti
TRE_0000385401
N
0.000
Traes_1DL_9FB53E48A
Triticum aestivum
Traes_1DL_9FB53E48A
N
0.000
Traes_3AL_F42853DA5
Triticum aestivum
Traes_3AL_F42853DA5
N
0.000
TRAES3BF096700010CFD_g
Triticum aestivum
TRAES3BF096700010CFD_g
N
0.000
TRAES3BF096700040CFD_g
Triticum aestivum
TRAES3BF096700040CFD_g
N
0.000
Traes_6BL_4301B7F15
Triticum aestivum
Traes_6BL_4301B7F15
N
0.000
Traes_6DL_D722B6E13
Triticum aestivum
Traes_6DL_D722B6E13
N
0.000
TRIUR3_29318
Triticum urartu
TRIUR3_29318
N
0.000
TRIUR3_32002
Triticum urartu
TRIUR3_32002
N
0.000
NKX6-3
Tursiops truncatus
ENSTTRG00000003567
N
0.000
Tal_R011355
Tyto alba
Tal_R011355
N
0.000
nkx6-1
Xenopus tropicalis
XB-GENE-483574
I
0.000
ENSXMAG00000003902
Xiphophorus maculatus
ENSXMAG00000003902
I
0.000
GRMZM2G004334
Zea mays
GRMZM2G004334
N
0.000
GRMZM2G123140
Zea mays
GRMZM2G123140
I
0.000
GRMZM2G381748
Zea mays
GRMZM2G381748
N
0.000