DICVIV_04922 (Dictyocaulus viviparus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 DICVIV_04922 T233596_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.853 0.947
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.853 0.947
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.853 0.947
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.853 0.930
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.853 0.930
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.853 0.912
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.853 0.912
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.853 0.912
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.853 0.912
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.853 0.912
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.853 0.912
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.853 0.912
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.853 0.912
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.853 0.912
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.853 0.912
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.853 0.912
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.853 0.912
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.853 0.912
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.853 0.912
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.808 0.930
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.808 0.930
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.808 0.930
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.808 0.930
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.808 0.930
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.802 0.895
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.802 0.895
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.705 0.596
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.663 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DICVIV_04922 Homeodomain 192 251

Links

Other Homeodomain family TFs
Other Dictyocaulus viviparus TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I
EBF3 Anolis carolinensis ENSACAG00000008590 I
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I
AALB010330 Anopheles albimanus AALB010330 I
AARA002865 Anopheles arabiensis AARA002865 I
AATE014419 Anopheles atroparvus AATE014419 I
ACHR004409 Anopheles christyi ACHR004409 I
ACOM041529 Anopheles coluzzii ACOM041529 I
ACUA010350 Anopheles culicifacies ACUA010350 I
ADAC003479 Anopheles darlingi ADAC003479 I
AEPI003553 Anopheles epiroticus AEPI003553 I
AFAF000230 Anopheles farauti AFAF000230 I
AFUN004906 Anopheles funestus AFUN004906 I
AMEC016105 Anopheles melas AMEC016105 I
AMEM017983 Anopheles merus AMEM017983 I
AQUA007473 Anopheles quadriannulatus AQUA007473 I
ASIS004664 Anopheles sinensis ASIS004664 I
ASTEI06456 Anopheles stephensi ASTEI06456 I
Afo_R003215 Aptenodytes forsteri Afo_R003215 I
Afo_R012023 Aptenodytes forsteri Afo_R012023 I
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I
ACEP22947 Atta cephalotes ACEP22947 I
BGLB009291 Biomphalaria glabrata BGLB009291 I
BGIBMGA011565 Bombyx mori BGIBMGA011565 I
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I
EBF3 Bos taurus ENSBTAG00000008272 I
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I
BTMF_0000130101 Brugia timori BTMF_0000130101 I
Brh_R001594 Buceros rhinoceros Brh_R001594 I
Brh_R003197 Buceros rhinoceros Brh_R003197 I
EBF2 Callithrix jacchus ENSCJAG00000019921 I
EBF4 Callithrix jacchus ENSCJAG00000021027 I
Aan_R013029 Calypte anna Aan_R013029 I
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I
EBF3 Canis familiaris ENSCAFG00000013267 I
Cmyd_10009821 Chelonia mydas Cmyd_10009821 I
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I
ebf1b Danio rerio ENSDARG00000069196 I
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I
YQE_08127 Dendroctonus ponderosae YQE_08127 I
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I
GF11778 Drosophila ananassae FBgn0088818 I
GH12956 Drosophila grimshawi FBgn0120434 I
GJ21945 Drosophila virilis FBgn0209060 I
EBF1 Equus caballus ENSECAG00000007964 I
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I
EBF2 Gallus gallus ENSGALG00000000242 I
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I
Gfo_R013267 Geospiza fortis Gfo_R013267 I
GPLIN_000159400 Globodera pallida GPLIN_000159400 I
EBF1 Gorilla gorilla ENSGGOG00000000033 I
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I
HMEL014948 Heliconius melpomene HMEL014948 I
HelroG112029 Helobdella robusta HelroG112029 I
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I
EBF1 Homo sapiens ENSG00000164330 D
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I
LotgiG225788 Lottia gigantea LotgiG225788 I
EBF1 Loxodonta africana ENSLAFG00000017522 I
LCUP013862 Lucilia cuprina LCUP013862 I
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I
ENSP00000405003 Macaca fascicularis ENSP00000405003 I
EBF4 Macaca mulatta ENSMMUG00000021331 I
EBF1 Macaca mulatta ENSMMUG00000021696 I
EBF2 Meleagris gallopavo ENSMGAG00000000791 I
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I
MCINX016126 Melitaea cinxia MCINX016126 I
MDOA011385 Musca domestica MDOA011385 I
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I
Ebf4 Mus musculus ENSMUSG00000053552 D
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I
Myotis_brandtii_EBF2_10005813 Myotis brandtii Myotis_brandtii_EBF2_10005813 I
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I
EBF3 Myotis lucifugus ENSMLUG00000005478 I
EBF2 Myotis lucifugus ENSMLUG00000011509 I
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I
Ogr00083 Ophisaurus gracilis Ogr00083 I
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I
EBF1 Otolemur garnettii ENSOGAG00000013992 I
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I
ENSPMAG00000004238 Petromyzon marinus ENSPMAG00000004238 I
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I
Pvit_11383 Pogona vitticeps Pvit_11383 I
Pvit_12046 Pogona vitticeps Pvit_12046 I
Pvit_12666 Pogona vitticeps Pvit_12666 I
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I
Ppa-unc-3 Pristionchus pacificus PPA20518 I
Ebf1 Rattus norvegicus ENSRNOG00000028845 I
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I
ENSSHAG00000018391 Sarcophilus harrisii ENSSHAG00000018391 I
SROB_0000545801 Schistosoma rodhaini SROB_0000545801 I
SMU15024001 Schmidtea mediterranea SMU15024001 I
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I
EBF1 Sus scrofa ENSSSCG00000017046 I
EBF2 Taeniopygia guttata ENSTGUG00000004267 I
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I
EBF1 Tupaia belangeri ENSTBEG00000007800 I
Tal_R004164 Tyto alba Tal_R004164 I
ebf2.S Xenopus laevis XB-GENE-971141 I
ebf2 Xenopus tropicalis XB-GENE-971136 I
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I