ENSGMOG00000007264 (Gadus morhua)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGMOG00000007264 T244120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.817 0.817
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.808 0.808
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.808 0.808
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.788 0.788
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.788 0.788
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.788 0.788
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.788 0.788
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.788 0.788
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.769 0.769
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.740 0.740
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.740 0.740
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.740 0.740
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.740 0.740
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.740 0.740
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.740 0.740
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.740 0.740
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.740 0.740
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000007757 IRF 10 114

Links

Other IRF family TFs
Other Gadus morhua TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I
ARNTL Anolis carolinensis ENSACAG00000004497 I
Afo_R014608 Aptenodytes forsteri Afo_R014608 I
ENSAMXG00000010089 Astyanax mexicanus ENSAMXG00000010089 I
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I
ENSAMXG00000020233 Astyanax mexicanus ENSAMXG00000020233 I
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I
ARNTL Bos taurus ENSBTAG00000013029 I
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I
Brh_R010633 Buceros rhinoceros Brh_R010633 I
ARNTL Callithrix jacchus ENSCJAG00000010162 I
Aan_R006598 Calypte anna Aan_R006598 I
ARNTL Canis familiaris ENSCAFG00000008095 I
ARNTL Cavia porcellus ENSCPOG00000008795 I
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I
CGI_10025278 Crassostrea gigas CGI_10025278 I
arntl1a Danio rerio ENSDARG00000006791 I
arntl2 Danio rerio ENSDARG00000041381 I
arntl1b Danio rerio ENSDARG00000035732 I
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I
Arntl Dipodomys ordii ENSDORG00000015539 I
ARNTL Equus caballus ENSECAG00000012118 I
ARNTL Felis catus ENSFCAG00000010983 I
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I
ARNTL Gallus gallus ENSGALG00000005378 I
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I
Gfo_R013617 Geospiza fortis Gfo_R013617 I
ARNTL Gorilla gorilla ENSGGOG00000013211 I
ARNTL Homo sapiens ENSG00000133794 D
ENSLACG00000004629 Latimeria chalumnae ENSLACG00000004629 I
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I
ARNTL Loxodonta africana ENSLAFG00000026673 I
ENSP00000384517 Macaca fascicularis ENSP00000384517 I
ARNTL Macaca mulatta ENSMMUG00000009690 I
ARNTL Meleagris gallopavo ENSMGAG00000005349 I
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I
ARNTL Monodelphis domestica ENSMODG00000008708 I
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I
Arntl Mus musculus ENSMUSG00000055116 D
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I
ARNTL Myotis lucifugus ENSMLUG00000008503 I
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I
ARNTL Ochotona princeps ENSOPRG00000004853 I
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I
Ogr18318 Ophisaurus gracilis Ogr18318 I
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I
ENSONIG00000014665 Oreochromis niloticus ENSONIG00000014665 I
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I
arntl2 Oryzias latipes ENSORLG00000010946 I
arntl1a Oryzias latipes ENSORLG00000019370 I
ARNTL Otolemur garnettii ENSOGAG00000000736 I
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I
ARNTL Pan troglodytes ENSPTRG00000003376 I
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I
ENSPMAG00000004171 Petromyzon marinus ENSPMAG00000004171 I
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I
ENSPFOG00000016287 Poecilia formosa ENSPFOG00000016287 I
Pvit_10294 Pogona vitticeps Pvit_10294 I
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I
ARNTL Pteropus vampyrus ENSPVAG00000006712 I
Arntl Rattus norvegicus ENSRNOG00000014448 D
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I
ARNTL Sus scrofa ENSSSCG00000013397 I
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I
arntl1a Takifugu rubripes ENSTRUG00000008391 I
arntl2 Takifugu rubripes ENSTRUG00000007832 I
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I
arntl2 Tetraodon nigroviridis ENSTNIG00000012142 I
ARNTL Tupaia belangeri ENSTBEG00000017387 I
ARNTL Tursiops truncatus ENSTTRG00000013925 I
Tal_R003521 Tyto alba Tal_R003521 I
ARNTL Vicugna pacos ENSVPAG00000005926 I
arntl.L Xenopus laevis XB-GENE-17342306 I
arntl.S Xenopus laevis XB-GENE-495459 I
arntl Xenopus tropicalis XB-GENE-495455 I
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I
ENSXMAG00000001482 Xiphophorus maculatus ENSXMAG00000001482 I