CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g035610
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_2g035610
T254730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES65118
MADS box
10
56
FIVNDAAQKATYKKRKNNLLKKVDELSTLCGIEACAIVQGPHEPQPH
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_08934
Cicer arietinum
Ca_08934
I
0.818
Cla005226
Citrullus lanatus
Cla005226
I
0.711
GLYMA11G33460
Glycine max
GLYMA11G33460
I
0.711
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.717
GLYMA18G05916
Glycine max
GLYMA18G05916
N
0.756
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.761
LjSGA_057783.1
Lotus japonicus
LjSGA_057783.1
I
0.704
LjSGA_107301.1
Lotus japonicus
LjSGA_107301.1
I
0.717
LjSGA_126766.1
Lotus japonicus
LjSGA_126766.1
I
0.733
LjSGA_147985.1
Lotus japonicus
LjSGA_147985.1
I
0.704
MTR_4g031910
Medicago truncatula
MTR_4g031910
N
0.739
MTR_4g032260
Medicago truncatula
MTR_4g032260
N
0.739
MTR_4g032290
Medicago truncatula
MTR_4g032290
N
0.717
MTR_8g036130
Medicago truncatula
MTR_8g036130
N
0.773