evm.TU.contig_28448.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_28448.1 T258053_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_28448.1 MADS box 10 56

Links

Other MADS box family TFs
Other Carica papaya TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017984 Ailuropoda melanoleuca ENSAMEG00000017984 I
Alligator_sinensis_CCG015719.1 Alligator sinensis Alligator_sinensis_CCG015719.1 I
Alligator_sinensis_CCG004564.1 Alligator sinensis Alligator_sinensis_CCG004564.1 I
Alligator_sinensis_CCG003696.1 Alligator sinensis Alligator_sinensis_CCG003696.1 I
ENSAPLG00000009319 Anas platyrhynchos ENSAPLG00000009319 I
IRF6 Anolis carolinensis ENSACAG00000005931 I
Afo_R001981 Aptenodytes forsteri Afo_R001981 I
ENSAMXG00000004616 Astyanax mexicanus ENSAMXG00000004616 I
ENSP00000349770-D2 Bos grunniens ENSP00000349770-D2 I
IRF6 Bos taurus ENSBTAG00000002849 I
IRF6 Callithrix jacchus ENSCJAG00000015032 I
IRF6 Canis familiaris ENSCAFG00000011971 I
IRF6 Cavia porcellus ENSCPOG00000023829 I
Cmyd_10002838 Chelonia mydas Cmyd_10002838 I
Cmyd_10010684 Chelonia mydas Cmyd_10010684 I
ENSCSAG00000015263 Chlorocebus sabaeus ENSCSAG00000015263 I
IRF6 Choloepus hoffmanni ENSCHOG00000010399 I
irf6 Danio rerio ENSDARG00000101986 I
irf5 Danio rerio ENSDARG00000045681 I
IRF6 Dasypus novemcinctus ENSDNOG00000001694 I
Irf6 Dipodomys ordii ENSDORG00000008891 I
IRF6 Echinops telfairi ENSETEG00000008368 I
IRF6 Equus caballus ENSECAG00000007482 I
IRF6 Felis catus ENSFCAG00000015138 I
ENSGMOG00000007264 Gadus morhua ENSGMOG00000007264 I
ENSGMOG00000007988 Gadus morhua ENSGMOG00000007988 I
IRF6 Gallus gallus ENSGALG00000001405 D
irf5 Gasterosteus aculeatus ENSGACG00000000695 I
irf6 Gasterosteus aculeatus ENSGACG00000000990 I
IRF6 Gorilla gorilla ENSGGOG00000006214 I
IRF5 Homo sapiens ENSG00000128604 D
IRF6 Homo sapiens ENSG00000117595 D
ENSSTOG00000028204 Ictidomys tridecemlineatus ENSSTOG00000028204 I
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I
ENSLACG00000018600 Latimeria chalumnae ENSLACG00000018600 I
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I
ENSLOCG00000011297 Lepisosteus oculatus ENSLOCG00000011297 I
IRF6 Loxodonta africana ENSLAFG00000001374 I
ENSP00000355988 Macaca fascicularis ENSP00000355988 I
IRF6 Macaca mulatta ENSMMUG00000022065 I
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I
IRF6 Meleagris gallopavo ENSMGAG00000004431 D
IRF6 Microcebus murinus ENSMICG00000001233 I
IRF6 Monodelphis domestica ENSMODG00000002539 I
IRF5 Monodelphis domestica ENSMODG00000014710 I
ENSMPUG00000003106 Mustela putorius furo ENSMPUG00000003106 I
Irf6 Mus musculus ENSMUSG00000026638 D
Myotis_brandtii_IRF6_10012270 Myotis brandtii Myotis_brandtii_IRF6_10012270 I
IRF6 Myotis lucifugus ENSMLUG00000004509 I
ENSNLEG00000001962 Nomascus leucogenys ENSNLEG00000001962 I
IRF6 Ochotona princeps ENSOPRG00000014295 I
Ogr12956 Ophisaurus gracilis Ogr12956 I
ENSONIG00000007600 Oreochromis niloticus ENSONIG00000007600 I
ENSONIG00000018961 Oreochromis niloticus ENSONIG00000018961 I
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I
IRF6 Oryctolagus cuniculus ENSOCUG00000004035 I
irf6 Oryzias latipes ENSORLG00000000511 I
IRF6 Otolemur garnettii ENSOGAG00000010708 I
ENSOARG00000012720 Ovis aries ENSOARG00000012720 I
ENSOARG00000020948 Ovis aries ENSOARG00000020948 I
IRF6 Pan troglodytes ENSPTRG00000001941 I
ENSPANG00000011328 Papio anubis ENSPANG00000011328 I
ENSPSIG00000003597 Pelodiscus sinensis ENSPSIG00000003597 I
ENSPFOG00000005876 Poecilia formosa ENSPFOG00000005876 I
ENSPFOG00000013528 Poecilia formosa ENSPFOG00000013528 I
ENSPFOG00000014077 Poecilia formosa ENSPFOG00000014077 I
Pvit_15428 Pogona vitticeps Pvit_15428 I
Pvit_14327 Pogona vitticeps Pvit_14327 I
ENSPPYG00000000253 Pongo abelii ENSPPYG00000000253 I
IRF6 Procavia capensis ENSPCAG00000006456 I
IRF6 Pteropus vampyrus ENSPVAG00000004865 I
Irf6 Rattus norvegicus ENSRNOG00000005082 I
ENSSHAG00000006683 Sarcophilus harrisii ENSSHAG00000006683 I
IRF6 Sus scrofa ENSSSCG00000015612 I
IRF6 Taeniopygia guttata ENSTGUG00000001485 I
irf6 Takifugu rubripes ENSTRUG00000006951 I
irf5 Takifugu rubripes ENSTRUG00000000641 I
ENSTSYG00000010982 Tarsius syrichta ENSTSYG00000010982 I
irf6 Tetraodon nigroviridis ENSTNIG00000014635 I
irf5 Tetraodon nigroviridis ENSTNIG00000003346 I
IRF6 Tursiops truncatus ENSTTRG00000001121 I
IRF6 Vicugna pacos ENSVPAG00000010247 I
irf5.L Xenopus laevis XB-GENE-998629 D
irf6.S Xenopus laevis XB-GENE-876421 I
irf6.2.L Xenopus laevis XB-GENE-5910427 I
irf6.2 Xenopus tropicalis XB-GENE-5910331 D
irf6 Xenopus tropicalis XB-GENE-876410 I
irf5 Xenopus tropicalis XB-GENE-998624 I
ENSXMAG00000007143 Xiphophorus maculatus ENSXMAG00000007143 I
ENSXMAG00000013056 Xiphophorus maculatus ENSXMAG00000013056 I