Thhalv10006277m.g (Eutrema salsugineum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Thhalv10006277m.g T261633_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006277m MBD 86 159
Thhalv10006287m MBD 82 155

Links

Other MBD family TFs
Other Eutrema salsugineum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_52642 Aegilops tauschii F775_52642 N
Aquca_003_00697 Aquilegia coerulea Aquca_003_00697 N
Aquca_020_00213 Aquilegia coerulea Aquca_020_00213 N
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
BHLH52 Arabidopsis thaliana AT1G30670 N
BHLH53 Arabidopsis thaliana AT2G34820 N
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N
Bo4g182930 Brassica oleracea Bo4g182930 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bo3g028090 Brassica oleracea Bo3g028090 N
Bra021933 Brassica rapa Bra021933 N
Bra022993 Brassica rapa Bra022993 N
Bra005389 Brassica rapa Bra005389 N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
evm.TU.supercontig_489.5 Carica papaya evm.TU.supercontig_489.5 N
evm.TU.supercontig_489.6 Carica papaya evm.TU.supercontig_489.6 N
Ca_13610 Cicer arietinum Ca_13610 N
Ca_13608 Cicer arietinum Ca_13608 N
Cla020055 Citrullus lanatus Cla020055 N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
Cucsa.167440 Cucumis sativus Cucsa.167440 N
Eucgr.D01630 Eucalyptus grandis Eucgr.D01630 N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
gene18542-v1.0-hybrid Fragaria vesca gene18542-v1.0-hybrid N
GLYMA08G17747 Glycine max GLYMA08G17747 N
GLYMA15G41400 Glycine max GLYMA15G41400 N
Gorai.005G218900 Gossypium raimondii Gorai.005G218900 N
Gorai.002G107000 Gossypium raimondii Gorai.002G107000 N
Lus10038432.g Linum usitatissimum Lus10038432.g N
Lus10005451.g Linum usitatissimum Lus10005451.g N
MDP0000209483 Malus domestica MDP0000209483 N
MDP0000216053 Malus domestica MDP0000216053 N
MDP0000280921 Malus domestica MDP0000280921 N
cassava27522.m1 Manihot esculenta cassava27522.m1 N
cassava8426.m1 Manihot esculenta cassava8426.m1 N
MTR_1g060700 Medicago truncatula MTR_1g060700 N
MTR_2g067000 Medicago truncatula MTR_2g067000 N
mgf020354m Mimulus guttatus mgf020354m N
POPTR_0001s46530 Populus trichocarpa POPTR_0001s46530 N
POPTR_0011s16100 Populus trichocarpa POPTR_0011s16100 N
Pm010610 Prunus mume Pm010610 N
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N
PRUPE_ppa025945mg Prunus persica PRUPE_ppa025945mg N
27996.m000153 Ricinus communis 27996.m000153 N
SapurV1A.0527s0040 Salix purpurea SapurV1A.0527s0040 N
SapurV1A.0602s0120 Salix purpurea SapurV1A.0602s0120 N
Si038598m.g Setaria italica Si038598m.g N
TCM_027032 Theobroma cacao TCM_027032 N
TCM_033386 Theobroma cacao TCM_033386 N
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N
VIT_10s0092g00030 Vitis vinifera VIT_10s0092g00030 N