BGIOSGA028709 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA028709 T266948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21166.1
M01281_2.00 		Cannabis sativa
HACCWAMY
RKTWGGTD		 PBM
Lambert et al.(2019)
pTH11255 		0.853 0.925
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.758 0.849
MYB99
M07151_2.00 		Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB99_col_a 		0.681 0.753
MYB99
M07152_2.00 		Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR		 Dap-seq
OMalley et al.(2016)
MYB99_colamp_a 		0.681 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA028709-PA Myb 14 61
BGIOSGA028709-PA Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N
Bo1g117640 Brassica oleracea Bo1g117640 N
Bra037587 Brassica rapa Bra037587 N
PK03811.1 Cannabis sativa PK03811.1 N
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N
Cucsa.032420 Cucumis sativus Cucsa.032420 N
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N
GLYMA12G18490 Glycine max GLYMA12G18490 N
GLYMA06G35561 Glycine max GLYMA06G35561 N
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N
MLOC_61712 Hordeum vulgare MLOC_61712 N
LPERR06G11990 Leersia perrieri LPERR06G11990 N
Lus10017944.g Linum usitatissimum Lus10017944.g N
Lus10013684.g Linum usitatissimum Lus10013684.g N
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N
MDP0000315095 Malus domestica MDP0000315095 N
MDP0000268133 Malus domestica MDP0000268133 N
MTR_8g061040 Medicago truncatula MTR_8g061040 N
mgf014854m Mimulus guttatus mgf014854m N
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N
OBART06G15310 Oryza barthii OBART06G15310 N
OLONG_009306 Oryza longistaminata OLONG_009306 N
OLONG_009303 Oryza longistaminata OLONG_009303 N
OMERI06G16500 Oryza meridionalis OMERI06G16500 N
OPUNC06G13990 Oryza punctata OPUNC06G13990 N
OPUNC06G13910 Oryza punctata OPUNC06G13910 N
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N
OS06G0485100 Oryza sativa OS06G0485100 N
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N
30209.m001510 Ricinus communis 30209.m001510 N
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N
Si030167m.g Setaria italica Si030167m.g N
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N
Sb02g020940 Sorghum bicolor Sb02g020940 N
TCM_046875 Theobroma cacao TCM_046875 N
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N
TRIUR3_19251 Triticum urartu TRIUR3_19251 N
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N
GRMZM2G126170 Zea mays GRMZM2G126170 N