Bo7g117880 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g117880 T267531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.721 0.817
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.708 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g117880.1 Myb 39 85
Bo7g117880.1 Myb 91 136

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.679
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.744
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.677
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.680
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.694
MYB25 Arabidopsis thaliana AT2G39880 I 0.706
MYB1 Arabidopsis thaliana AT3G09230 D 0.721
MYB109 Arabidopsis thaliana AT3G55730 I 0.681
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.722
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I 0.760
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.680
Bo1g144680 Brassica oleracea Bo1g144680 I 0.850
Bo3g062160 Brassica oleracea Bo3g062160 I 0.762
Bo4g025810 Brassica oleracea Bo4g025810 I 0.683
Bo8g090160 Brassica oleracea Bo8g090160 I 0.722
Bra001323 Brassica rapa Bra001323 I 0.807
Bra005006 Brassica rapa Bra005006 I 0.688
Bra007186 Brassica rapa Bra007186 I 0.731
Bra034057 Brassica rapa Bra034057 I 0.862
PK07741.1 Cannabis sativa PK07741.1 D 0.708
PK17282.1 Cannabis sativa PK17282.1 I 0.672
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.669
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.724
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.724
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.669
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.675
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.675
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.678
e_gw1.3.545.1 Chlorella vulgaris e_gw1.3.545.1 N 0.676
Ca_12468 Cicer arietinum Ca_12468 I 0.702
Cla004431 Citrullus lanatus Cla004431 I 0.680
Cla020946 Citrullus lanatus Cla020946 I 0.666
Cla021015 Citrullus lanatus Cla021015 I 0.663
Cla022947 Citrullus lanatus Cla022947 I 0.691
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.672
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.668
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.672
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.668
e_gw1.3.530.1 Coccomyxa subellipsoidea C169 e_gw1.3.530.1 N 0.676
Cucsa.073130 Cucumis sativus Cucsa.073130 I 0.673
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.666
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.671
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.691
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.686
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.665
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.665
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.710
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.722
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.687
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.733
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.661
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.674
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I 0.666
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.698
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.662
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.668
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.671
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.698
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.664
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.694
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.689
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.682
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.669
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.689
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.686
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.701
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.691
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.678
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.669
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.665
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.672
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.684
MDP0000275800 Malus domestica MDP0000275800 I 0.662
MDP0000284922 Malus domestica MDP0000284922 I 0.689
MDP0000463846 Malus domestica MDP0000463846 I 0.666
MDP0000807341 Malus domestica MDP0000807341 I 0.673
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.682
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.674
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.672
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.662
mgf002573m Mimulus guttatus mgf002573m I 0.662
mgf018580m Mimulus guttatus mgf018580m I 0.694
mgf020432m Mimulus guttatus mgf020432m I 0.666
mgf023922m Mimulus guttatus mgf023922m I 0.688
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.670
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.665
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.673
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.672
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.679
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.665
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.691
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.665
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.708
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.673
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.675
OBART01G37390 Oryza barthii OBART01G37390 I 0.721
OB01G46120 Oryza brachyantha OB01G46120 I 0.691
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.721
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.721
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.721
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.721
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.724
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.721
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.721
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.721
OS01G0850400 Oryza sativa OS01G0850400 I 0.721
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.721
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.721
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.686
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.691
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.666
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.704
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.666
Pm005332 Prunus mume Pm005332 I 0.666
Pm018862 Prunus mume Pm018862 I 0.688
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.666
29814.m000736 Ricinus communis 29814.m000736 I 0.674
30170.m013698 Ricinus communis 30170.m013698 I 0.672
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.691
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.672
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.684
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.666
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.666
Si001686m.g Setaria italica Si001686m.g I 0.669
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.682
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.682
TCM_042629 Theobroma cacao TCM_042629 I 0.689
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.677
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.686
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.665