CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
F443_04247
(
Phytophthora parasitica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
F443_04247
T270246_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra72796
M02331_2.00
Phytophthora ramorum
NHAYCYNNN
NNNRGRTDN
PBM
Weirauch et al.(2014)
pTH7803
0.875
0.979
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI52696
Myb
27
73
KGIWSLEEHDRFLEAMKLYPKGPWKTIADHIATRSVRQVQTHAQKYQ
Links
Other
Myb/SANT
family TFs
Other
Phytophthora parasitica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATGRP2B
Arabidopsis lyrata
fgenesh2_kg.4__14__AT2G21060.1
I
GRP2
Arabidopsis lyrata
scaffold_700059.1
I
CSP2
Arabidopsis thaliana
AT4G38680
I
CSP4
Arabidopsis thaliana
AT2G21060
D
Bostr.25542s0051
Boechera stricta
Bostr.25542s0051
I
Bo2g119240
Brassica oleracea
Bo2g119240
I
Bo4g145670
Brassica oleracea
Bo4g145670
I
Bo7g049880
Brassica oleracea
Bo7g049880
I
Bo8g102040
Brassica oleracea
Bo8g102040
I
Bra030325
Brassica rapa
Bra030325
I
Bra031159
Brassica rapa
Bra031159
I
PK26692.1
Cannabis sativa
PK26692.1
I
Cagra.2961s0009
Capsella grandiflora
Cagra.2961s0009
I
Eucgr.I01395
Eucalyptus grandis
Eucgr.I01395
N
gene07618-v1.0-hybrid
Fragaria vesca
gene07618-v1.0-hybrid
N
Gorai.002G195000
Gossypium raimondii
Gorai.002G195000
I
Gorai.002G195100
Gossypium raimondii
Gorai.002G195100
I
Gorai.005G253200
Gossypium raimondii
Gorai.005G253200
I
Lus10005066.g
Linum usitatissimum
Lus10005066.g
N
Lus10027839.g
Linum usitatissimum
Lus10027839.g
N
Lus10034487.g
Linum usitatissimum
Lus10034487.g
I
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
mgf015980m
Mimulus guttatus
mgf015980m
I
Pm020837
Prunus mume
Pm020837
I
Solyc10g055250.1
Solanum lycopersicum
Solyc10g055250.1
I
PGSC0003DMG400023206
Solanum tuberosum
PGSC0003DMG400023206
I
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I