fgenesh2_kg.3__2684__AT5G58850.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.3__2684__AT5G58850.1 T270773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.672 0.753
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.672 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2684__AT5G58850.1 Myb 105 151
fgenesh2_kg.3__2684__AT5G58850.1 Myb 157 202

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_016_00429 Aquilegia coerulea Aquca_016_00429 N
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N
Bo6g124000 Brassica oleracea Bo6g124000 N
Bo2g116250 Brassica oleracea Bo2g116250 N
Bra035129 Brassica rapa Bra035129 N
Bra035324 Brassica rapa Bra035324 N
PK09561.1 Cannabis sativa PK09561.1 N
Carubv10014420m.g Capsella rubella Carubv10014420m.g N
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N
Ca_01536 Cicer arietinum Ca_01536 N
Ciclev10002314m.g Citrus clementina Ciclev10002314m.g N
orange1.1g026276m.g Citrus sinensis orange1.1g026276m.g N
Cucsa.232760 Cucumis sativus Cucsa.232760 N
Eucgr.F02358 Eucalyptus grandis Eucgr.F02358 N
GLYMA04G04030 Glycine max GLYMA04G04030 N
GLYMA06G04200 Glycine max GLYMA06G04200 N
Gorai.002G131600 Gossypium raimondii Gorai.002G131600 N
LPERR06G05590 Leersia perrieri LPERR06G05590 N
Lus10006483.g Linum usitatissimum Lus10006483.g N
Lus10009764.g Linum usitatissimum Lus10009764.g N
Lus10014044.g Linum usitatissimum Lus10014044.g N
MTR_3g101520 Medicago truncatula MTR_3g101520 N
mgf008645m Mimulus guttatus mgf008645m N
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N
SapurV1A.0361s0280 Salix purpurea SapurV1A.0361s0280 N
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N
TCM_033870 Theobroma cacao TCM_033870 N