GSMUA_Achr2G18200_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr2G18200_001 T272370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.682 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P18200_001 Myb 312 362

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.807
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.692
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.682
APRR2 Arabidopsis thaliana AT4G18020 D 0.682
PK19826.1 Cannabis sativa PK19826.1 I 0.700
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.771
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.771
Ca_02285 Cicer arietinum Ca_02285 I 0.789
Ca_24009 Cicer arietinum Ca_24009 I 0.722
Ca_12825 Cicer arietinum Ca_12825 I 0.781
Cla008926 Citrullus lanatus Cla008926 I 0.703
Cla016403 Citrullus lanatus Cla016403 I 0.733
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.700
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.700
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.703
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.787
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.692
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.700
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.771
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.789
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.771
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.778
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.755
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.750
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.789
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.684
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.663
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.771
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.781
MDP0000237396 Malus domestica MDP0000237396 I 0.686
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.763
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.763
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.755
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.774
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.792
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.661
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.718
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.671
Pm014733 Prunus mume Pm014733 I 0.700
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.700
30054.m000786 Ricinus communis 30054.m000786 I 0.675
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.781
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.702
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.702
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.781
TCM_015780 Theobroma cacao TCM_015780 I 0.749