PHLGIDRAFT_130624 (Phlebiopsis gigantea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PHLGIDRAFT_130624 T277838_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.751 0.835
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.751 0.835
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.723 0.791
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIP02657 Myb 9 54
KIP02657 Myb 60 104

Links

Other Myb/SANT family TFs
Other Phlebiopsis gigantea TFs

546 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00917 Aegilops tauschii F775_00917 I
AMTR_s00009p00194700 Amborella trichopoda AMTR_s00009p00194700 N
AMTR_s00012p00258620 Amborella trichopoda AMTR_s00012p00258620 N
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I
RBE Arabidopsis lyrata fgenesh2_kg.6__542__AT5G06070.1 I
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I
scaffold_800693.1 Arabidopsis lyrata scaffold_800693.1 N
ZFP11 Arabidopsis thaliana AT2G42410 I
SUP Arabidopsis thaliana AT3G23130 I
RBE Arabidopsis thaliana AT5G06070 D
Bostr.13129s0367 Boechera stricta Bostr.13129s0367 I
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I
Bostr.3148s0115 Boechera stricta Bostr.3148s0115 N
BRADI1G52490 Brachypodium distachyon BRADI1G52490 I
Bo1g102390 Brassica oleracea Bo1g102390 I
Bo3g003640 Brassica oleracea Bo3g003640 I
Bo7g065530 Brassica oleracea Bo7g065530 N
Bo9g059250 Brassica oleracea Bo9g059250 N
Bo9g176590 Brassica oleracea Bo9g176590 I
Bra005874 Brassica rapa Bra005874 I
Bra009160 Brassica rapa Bra009160 I
Bra023759 Brassica rapa Bra023759 I
Bra027500 Brassica rapa Bra027500 N
Bra033683 Brassica rapa Bra033683 N
PK22236.1 Cannabis sativa PK22236.1 N
Cagra.19122s0001 Capsella grandiflora Cagra.19122s0001 N
Cagra.2117s0055 Capsella grandiflora Cagra.2117s0055 I
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I
Carubv10002935m.g Capsella rubella Carubv10002935m.g I
Carubv10016073m.g Capsella rubella Carubv10016073m.g I
Carubv10024766m.g Capsella rubella Carubv10024766m.g I
Carubv10028256m.g Capsella rubella Carubv10028256m.g N
evm.TU.supercontig_44.98 Carica papaya evm.TU.supercontig_44.98 N
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I
Cla006093 Citrullus lanatus Cla006093 N
Cla008348 Citrullus lanatus Cla008348 N
Cla021877 Citrullus lanatus Cla021877 N
Ciclev10006751m.g Citrus clementina Ciclev10006751m.g N
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I
Ciclev10022375m.g Citrus clementina Ciclev10022375m.g N
orange1.1g037433m.g Citrus sinensis orange1.1g037433m.g N
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I
orange1.1g044013m.g Citrus sinensis orange1.1g044013m.g N
Cucsa.016990 Cucumis sativus Cucsa.016990 N
Cucsa.117650 Cucumis sativus Cucsa.117650 N
Eucgr.H00184 Eucalyptus grandis Eucgr.H00184 N
Thhalv10015420m.g Eutrema salsugineum Thhalv10015420m.g I
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I
gene30215-v1.0-hybrid Fragaria vesca gene30215-v1.0-hybrid N
GLYMA07G16290 Glycine max GLYMA07G16290 I
GLYMA10G32810 Glycine max GLYMA10G32810 N
GLYMA12G06340 Glycine max GLYMA12G06340 N
GLYMA20G34840 Glycine max GLYMA20G34840 N
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I
Gorai.008G226800 Gossypium raimondii Gorai.008G226800 I
Gorai.011G172000 Gossypium raimondii Gorai.011G172000 N
Gorai.012G106300 Gossypium raimondii Gorai.012G106300 I
MLOC_76482 Hordeum vulgare MLOC_76482 I
LPERR05G08090 Leersia perrieri LPERR05G08090 I
LPERR07G09750 Leersia perrieri LPERR07G09750 N
Lus10021213.g Linum usitatissimum Lus10021213.g I
Lus10022204.g Linum usitatissimum Lus10022204.g I
chr1.CM0147.870.nc Lotus japonicus chr1.CM0147.870.nc I
MDP0000143134 Malus domestica MDP0000143134 N
MDP0000225209 Malus domestica MDP0000225209 I
cassava14614.m1 Manihot esculenta cassava14614.m1 I
cassava32634.m1 Manihot esculenta cassava32634.m1 N
cassava3359.m1 Manihot esculenta cassava3359.m1 I
cassava40050.m1 Manihot esculenta cassava40050.m1 I
cassava4410.m1 Manihot esculenta cassava4410.m1 N
MTR_1g070250 Medicago truncatula MTR_1g070250 N
MTR_1g070265 Medicago truncatula MTR_1g070265 I
MTR_1g075430 Medicago truncatula MTR_1g075430 N
MTR_4g064873 Medicago truncatula MTR_4g064873 N
MTR_7g063220 Medicago truncatula MTR_7g063220 I
mgf024356m Mimulus guttatus mgf024356m I
GSMUA_Achr11G02150_001 Musa acuminata GSMUA_Achr11G02150_001 N
GSMUA_Achr7G26850_001 Musa acuminata GSMUA_Achr7G26850_001 I
GSMUA_Achr8G14360_001 Musa acuminata GSMUA_Achr8G14360_001 N
OBART05G10090 Oryza barthii OBART05G10090 I
OBART07G11660 Oryza barthii OBART07G11660 N
OBART11G23770 Oryza barthii OBART11G23770 I
OB05G18710 Oryza brachyantha OB05G18710 I
OB07G18110 Oryza brachyantha OB07G18110 N
ORGLA05G0088100 Oryza glaberrima ORGLA05G0088100 I
ORGLA07G0099100 Oryza glaberrima ORGLA07G0099100 N
OGLUM05G10360 Oryza glumaepatula OGLUM05G10360 I
OGLUM07G11160 Oryza glumaepatula OGLUM07G11160 N
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I
BGIOSGA018378 Oryza indica BGIOSGA018378 I
BGIOSGA025569 Oryza indica BGIOSGA025569 N
BGIOSGA033510 Oryza indica BGIOSGA033510 I
OLONG_005038 Oryza longistaminata OLONG_005038 I
OLONG_012182 Oryza longistaminata OLONG_012182 N
OLONG_023754 Oryza longistaminata OLONG_023754 I
OMERI07G13080 Oryza meridionalis OMERI07G13080 I
ONIVA06G26970 Oryza nivara ONIVA06G26970 I
ONIVA07G09630 Oryza nivara ONIVA07G09630 N
ONIVA07G09640 Oryza nivara ONIVA07G09640 N
ONIVA11G23290 Oryza nivara ONIVA11G23290 I
OPUNC05G08760 Oryza punctata OPUNC05G08760 I
OPUNC07G10480 Oryza punctata OPUNC07G10480 N
ORUFI05G10920 Oryza rufipogon ORUFI05G10920 I
ORUFI07G11810 Oryza rufipogon ORUFI07G11810 N
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I
OS05G0286100 Oryza sativa OS05G0286100 I
OS07G0417400 Oryza sativa OS07G0417400 N
OS11G0707300 Oryza sativa OS11G0707300 I
Pavir.Aa03593 Panicum virgatum Pavir.Aa03593 I
Pavir.Ab00024 Panicum virgatum Pavir.Ab00024 I
Pavir.Ba02387 Panicum virgatum Pavir.Ba02387 I
Pavir.Bb00955 Panicum virgatum Pavir.Bb00955 I
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I
PDK_20s1360411g002 Phoenix dactylifera PDK_20s1360411g002 N
e_gw1.1.457.1 Physcomitrella patens e_gw1.1.457.1 I
e_gw1.6.268.1 Physcomitrella patens e_gw1.6.268.1 I
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I
Pm002649 Prunus mume Pm002649 N
Pm009419 Prunus mume Pm009419 N
Pm009420 Prunus mume Pm009420 I
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I
PRUPE_ppa016491mg Prunus persica PRUPE_ppa016491mg N
PRUPE_ppa021945mg Prunus persica PRUPE_ppa021945mg N
PRUPE_ppb012667mg Prunus persica PRUPE_ppb012667mg N
28345.m000111 Ricinus communis 28345.m000111 N
29603.m000536 Ricinus communis 29603.m000536 I
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I
SapurV1A.0007s0800 Salix purpurea SapurV1A.0007s0800 I
SapurV1A.0292s0190 Salix purpurea SapurV1A.0292s0190 I
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I
SapurV1A.0378s0150 Salix purpurea SapurV1A.0378s0150 I
Si019050m.g Setaria italica Si019050m.g I
Si024070m.g Setaria italica Si024070m.g I
Si032478m.g Setaria italica Si032478m.g I
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I
Sb02g009930 Sorghum bicolor Sb02g009930 I
TCM_020819 Theobroma cacao TCM_020819 N
TCM_021875 Theobroma cacao TCM_021875 I
TCM_021876 Theobroma cacao TCM_021876 N
Traes_1AL_80D0BD0DC Triticum aestivum Traes_1AL_80D0BD0DC I
Traes_1BL_4026DC5011 Triticum aestivum Traes_1BL_4026DC5011 I
Traes_2BS_0544D9D4B Triticum aestivum Traes_2BS_0544D9D4B I
Traes_2DS_035AA95E3 Triticum aestivum Traes_2DS_035AA95E3 I
TRIUR3_03721 Triticum urartu TRIUR3_03721 I
TRIUR3_04794 Triticum urartu TRIUR3_04794 I
TRIUR3_25222 Triticum urartu TRIUR3_25222 I
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I
VIT_06s0004g05260 Vitis vinifera VIT_06s0004g05260 N
GRMZM2G409452 Zea mays GRMZM2G409452 I
GRMZM2G443109 Zea mays GRMZM2G443109 I