Cagra.4190s0013 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.4190s0013 T286144_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.4190s0013.1.p Myb 46 104

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.870
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N 0.731
GT-3B Arabidopsis thaliana AT2G38250 N 0.870
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N 0.731
Bo3g001460 Brassica oleracea Bo3g001460 N 0.671
Bo3g032310 Brassica oleracea Bo3g032310 N 0.824
Bo4g029680 Brassica oleracea Bo4g029680 N 0.858
Bo9g186070 Brassica oleracea Bo9g186070 N 0.729
Bra005688 Brassica rapa Bra005688 N 0.731
Bra005127 Brassica rapa Bra005127 N 0.824
Bra000046 Brassica rapa Bra000046 N 0.824
PK23483.1 Cannabis sativa PK23483.1 N 0.839
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N 0.731
Carubv10001432m.g Capsella rubella Carubv10001432m.g N 0.731
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.795
Ca_22200 Cicer arietinum Ca_22200 N 0.849
Ca_10636 Cicer arietinum Ca_10636 N 0.686
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.667
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.667
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N 0.684
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N 0.731
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.780
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.686
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N 0.687
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.752
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.686
MDP0000269977 Malus domestica MDP0000269977 N 0.788
MDP0000296708 Malus domestica MDP0000296708 N 0.788
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.713
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.686
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.767
POPTR_0001s01210 Populus trichocarpa POPTR_0001s01210 N 0.701
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N 0.687
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.693
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.695
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.693
SapurV1A.1378s0050 Salix purpurea SapurV1A.1378s0050 N 0.663
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.701
Solyc09g005560.2 Solanum lycopersicum Solyc09g005560.2 N 0.764
PGSC0003DMG400030246 Solanum tuberosum PGSC0003DMG400030246 N 0.764
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.663