Gorai.004G130900 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.004G130900 T287532_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.717 0.785
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.711 0.785
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.711 0.785
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.703 0.806
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.685 0.753
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.679 0.677
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.679 0.677
GRMZM2G005066
M11056_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$C1_Q2 		0.667 0.699
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.666 0.699
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.666 0.699
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.662 0.742
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.662 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G130900.1 Myb 14 61
Gorai.004G130900.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

818 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I
ASU_01867 Ascaris suum ASU_01867 I
Bm1750 Brugia malayi Bm1750 I
BTMF_0000215901 Brugia timori BTMF_0000215901 N
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I
CBN11281 Caenorhabditis brenneri CBN11281 I
CBG13470 Caenorhabditis briggsae CBG13470 I
hlh-1 Caenorhabditis elegans WBGene00001948 D
CJA13327 Caenorhabditis japonica CJA13327 I
CRE17301 Caenorhabditis remanei CRE17301 I
CapteG36721 Capitella teleta CapteG36721 I
CGI_10007380 Crassostrea gigas CGI_10007380 I
YQE_11476 Dendroctonus ponderosae YQE_11476 I
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I
HCOI02168200 Haemonchus contortus HCOI02168200 I
LDEC009949 Leptinotarsa decemlineata LDEC009949 I
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I
LOAG_16988 Loa loa LOAG_16988 I
NECAME_14163 Necator americanus NECAME_14163 I
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I
WBGene00247572 Onchocerca volvulus WBGene00247572 I
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I
Ppa-hlh-1 Pristionchus pacificus PPA08246 I
SMUV_0000995901 Syphacia muris SMUV_0000995901 I
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I
TC015855 Tribolium castaneum TC015855 I
WUBG_05117 Wuchereria bancrofti WUBG_05117 I