Lus10039966.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10039966.g T288225_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.722 0.828
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.722 0.828
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10039966 Myb 157 203
Lus10039966 Myb 208 253

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22212 Aegilops tauschii F775_22212 I 0.733
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.678
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.682
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.682
MYB98 Arabidopsis lyrata scaffold_702543.1 I 0.722
MYB98 Arabidopsis thaliana AT4G18770 D 0.722
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I 0.671
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I 0.746
Bo1g019910 Brassica oleracea Bo1g019910 I 0.746
Bo3g157300 Brassica oleracea Bo3g157300 I 0.749
Bo7g106240 Brassica oleracea Bo7g106240 I 0.721
Bra012579 Brassica rapa Bra012579 I 0.708
Bra013346 Brassica rapa Bra013346 I 0.746
Bra020992 Brassica rapa Bra020992 I 0.740
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.673
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I 0.671
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I 0.746
Carubv10006734m.g Capsella rubella Carubv10006734m.g I 0.746
Carubv10018693m.g Capsella rubella Carubv10018693m.g I 0.671
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.673
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.707
Ca_07482 Cicer arietinum Ca_07482 I 0.678
Ca_17087 Cicer arietinum Ca_17087 I 0.683
Ca_17294 Cicer arietinum Ca_17294 I 0.691
Ca_19427 Cicer arietinum Ca_19427 I 0.662
Cla010586 Citrullus lanatus Cla010586 I 0.680
Cla019490 Citrullus lanatus Cla019490 I 0.751
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.744
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.744
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.744
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.715
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I 0.680
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I 0.758
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.700
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.706
GLYMA06G19280 Glycine max GLYMA06G19280 I 0.701
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.666
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.688
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.740
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.742
Lus10002384.g Linum usitatissimum Lus10002384.g I 0.735
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.673
Lus10027695.g Linum usitatissimum Lus10027695.g I 0.859
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.669
Lus10042111.g Linum usitatissimum Lus10042111.g I 0.774
MDP0000199939 Malus domestica MDP0000199939 I 0.698
MDP0000215359 Malus domestica MDP0000215359 I 0.715
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.700
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.720
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.698
MTR_4g105660 Medicago truncatula MTR_4g105660 N 0.690
MTR_7g037260 Medicago truncatula MTR_7g037260 I 0.668
mgf023372m Mimulus guttatus mgf023372m I 0.666
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.690
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.727
OBART06G04170 Oryza barthii OBART06G04170 I 0.724
OBART12G04480 Oryza barthii OBART12G04480 I 0.699
OBART12G04500 Oryza barthii OBART12G04500 I 0.699
OB06G13860 Oryza brachyantha OB06G13860 I 0.733
OB12G14410 Oryza brachyantha OB12G14410 I 0.662
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.724
ORGLA12G0042300 Oryza glaberrima ORGLA12G0042300 I 0.699
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.724
OGLUM12G05330 Oryza glumaepatula OGLUM12G05330 I 0.699
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.724
BGIOSGA036541 Oryza indica BGIOSGA036541 I 0.699
OLONG_008158 Oryza longistaminata OLONG_008158 I 0.699
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.724
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.724
OMERI12G02760 Oryza meridionalis OMERI12G02760 I 0.699
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.724
ONIVA12G04220 Oryza nivara ONIVA12G04220 I 0.699
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.724
OPUNC12G04510 Oryza punctata OPUNC12G04510 I 0.699
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.724
ORUFI12G05180 Oryza rufipogon ORUFI12G05180 I 0.699
OS06G0162700 Oryza sativa OS06G0162700 I 0.724
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.717
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.717
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.693
Pavir.J37434 Panicum virgatum Pavir.J37434 I 0.680
MYB118 Populus trichocarpa POPTR_0001s35140 I 0.677
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I 0.746
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.670
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.733
Pm015681 Prunus mume Pm015681 I 0.735
Pm024743 Prunus mume Pm024743 I 0.715
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.735
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.715
29917.m001977 Ricinus communis 29917.m001977 I 0.714
30147.m013937 Ricinus communis 30147.m013937 I 0.769
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I 0.751
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.668
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.715
Si039046m.g Setaria italica Si039046m.g I 0.700
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I 0.717
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.691
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I 0.717
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.735
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.691
TCM_012087 Theobroma cacao TCM_012087 I 0.740
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.720
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.719
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.733
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.733
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I 0.704
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.733
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.700
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.685