orange1.1g018583m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g018583m.g T288804_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g018583m Myb 185 236
orange1.1g025958m Myb 185 236

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.760
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.703
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I 0.672
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.800
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.800
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.909
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.891
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.909
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.699
Bo2g007410 Brassica oleracea Bo2g007410 N 0.909
Bo3g004040 Brassica oleracea Bo3g004040 N 0.885
Bo9g175820 Brassica oleracea Bo9g175820 I 0.849
Bra005912 Brassica rapa Bra005912 N 0.885
Bra009228 Brassica rapa Bra009228 I 0.831
Bra028717 Brassica rapa Bra028717 N 0.909
PK00827.1 Cannabis sativa PK00827.1 N 0.848
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.849
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.849
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.894
Ca_07304 Cicer arietinum Ca_07304 I 0.756
Ca_14198 Cicer arietinum Ca_14198 N 0.861
Cla011853 Citrullus lanatus Cla011853 N 0.909
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.676
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.909
Ciclev10015819m.g Citrus clementina Ciclev10015819m.g I 0.668
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.782
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.676
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.782
orange1.1g038268m.g Citrus sinensis orange1.1g038268m.g I 0.668
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.909
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.828
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.909
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.852
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.861
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.817
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.901
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.672
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.817
Gorai.001G225500 Gossypium raimondii Gorai.001G225500 N 0.671
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.891
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.894
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.669
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.665
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.699
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.909
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.688
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.908
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.672
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.795
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.801
MDP0000121180 Malus domestica MDP0000121180 N 0.676
MDP0000142146 Malus domestica MDP0000142146 I 0.679
MDP0000179986 Malus domestica MDP0000179986 N 0.676
MDP0000182154 Malus domestica MDP0000182154 I 0.679
MDP0000184307 Malus domestica MDP0000184307 N 0.852
MDP0000253656 Malus domestica MDP0000253656 N 0.852
MDP0000280005 Malus domestica MDP0000280005 N 0.845
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.731
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.909
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.909
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.693
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.909
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.901
MTR_7g068600 Medicago truncatula MTR_7g068600 N 0.688
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.857
est_orfs.1_306_4269596:1 Micromonas pusilla est_orfs.1_306_4269596:1 I 0.664
mgf007532m Mimulus guttatus mgf007532m N 0.787
mgf007985m Mimulus guttatus mgf007985m N 0.787
mgf015795m Mimulus guttatus mgf015795m N 0.664
mgf017208m Mimulus guttatus mgf017208m N 0.778
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.758
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.780
OBART04G28680 Oryza barthii OBART04G28680 I 0.699
OB04G35670 Oryza brachyantha OB04G35670 I 0.699
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.699
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.699
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.699
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.699
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.699
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.699
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.699
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.699
OS04G0665600 Oryza sativa OS04G0665600 I 0.699
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.699
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.688
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N 0.706
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I 0.675
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.675
fgenesh2_pg.scaffold_82000058 Physcomitrella patens fgenesh2_pg.scaffold_82000058 I 0.669
POPTR_0001s23560 Populus trichocarpa POPTR_0001s23560 N 0.732
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.901
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.891
Pm025973 Prunus mume Pm025973 N 0.852
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.852
28582.m000316 Ricinus communis 28582.m000316 N 0.909
28582.m000317 Ricinus communis 28582.m000317 N 0.732
28582.m000318 Ricinus communis 28582.m000318 N 0.751
30226.m001993 Ricinus communis 30226.m001993 N 0.772
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N 0.747
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.891
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.909
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N 0.747
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I 0.675
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I 0.675
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.675
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.675
Si022099m.g Setaria italica Si022099m.g I 0.699
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.675
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.842
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.695
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.842
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.695
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.667
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.699
TCM_024886 Theobroma cacao TCM_024886 N 0.891
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.804
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.826
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.667
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.700
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.699