Bo6g079180 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo6g079180 T292431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.945 0.939
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.944 0.912
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.944 0.912
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.944 0.912
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.897 0.842
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.879 0.868
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.872 0.860
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g079180.1 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11081 Aegilops tauschii F775_11081 I 0.891
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I 0.925
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.914
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.872
NST1 Arabidopsis lyrata scaffold_403649.1 I 0.944
NST2 Arabidopsis lyrata scaffold_503455.1 I 0.957
NAC012 Arabidopsis thaliana AT1G32770 D 0.872
NAC043 Arabidopsis thaliana AT2G46770 D 0.944
NAC066 Arabidopsis thaliana AT3G61910 D 0.945
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I 0.962
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I 0.944
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.873
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I 0.882
Bo4g006990 Brassica oleracea Bo4g006990 I 0.944
Bo4g197330 Brassica oleracea Bo4g197330 I 0.946
Bo5g049360 Brassica oleracea Bo5g049360 I 0.871
Bra003478 Brassica rapa Bra003478 I 0.962
Bra004509 Brassica rapa Bra004509 I 0.944
Bra007640 Brassica rapa Bra007640 I 0.962
Bra040486 Brassica rapa Bra040486 I 0.946
PK04961.1 Cannabis sativa PK04961.1 I 0.921
PK22182.1 Cannabis sativa PK22182.1 I 0.875
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I 0.944
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I 0.958
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.872
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.872
Carubv10019223m.g Capsella rubella Carubv10019223m.g I 0.958
Carubv10023503m.g Capsella rubella Carubv10023503m.g I 0.944
Ca_22425 Cicer arietinum Ca_22425 I 0.927
Ca_22426 Cicer arietinum Ca_22426 I 0.926
Cla006806 Citrullus lanatus Cla006806 I 0.922
Cla011508 Citrullus lanatus Cla011508 I 0.914
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.872
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.908
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.872
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.908
Cucsa.120870 Cucumis sativus Cucsa.120870 I 0.922
Cucsa.193460 Cucumis sativus Cucsa.193460 I 0.914
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I 0.916
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.876
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I 0.944
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.872
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.872
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I 0.927
GLYMA07G05660 Glycine max GLYMA07G05660 I 0.926
GLYMA16G02200 Glycine max GLYMA16G02200 I 0.926
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I 0.919
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.871
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I 0.923
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.887
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.873
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.891
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.897
LPERR08G01440 Leersia perrieri LPERR08G01440 I 0.888
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.875
Lus10002687.g Linum usitatissimum Lus10002687.g I 0.926
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.871
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.875
Lus10030205.g Linum usitatissimum Lus10030205.g I 0.923
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.871
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I 0.926
MDP0000140229 Malus domestica MDP0000140229 I 0.879
MDP0000563165 Malus domestica MDP0000563165 I 0.927
MDP0000762302 Malus domestica MDP0000762302 D 0.879
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.884
cassava33021.m1 Manihot esculenta cassava33021.m1 I 0.922
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.872
MTR_8g024480 Medicago truncatula MTR_8g024480 I 0.926
mgf022455m Mimulus guttatus mgf022455m I 0.905
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.912
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I 0.897
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.910
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I 0.908
OBART06G01950 Oryza barthii OBART06G01950 I 0.897
OBART08G01110 Oryza barthii OBART08G01110 I 0.891
OB06G11970 Oryza brachyantha OB06G11970 I 0.897
OB08G11290 Oryza brachyantha OB08G11290 I 0.891
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.897
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I 0.891
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.897
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I 0.891
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.897
BGIOSGA027883 Oryza indica BGIOSGA027883 I 0.891
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.897
OMERI08G01360 Oryza meridionalis OMERI08G01360 I 0.900
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.897
ONIVA08G01130 Oryza nivara ONIVA08G01130 I 0.891
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.897
OPUNC08G01110 Oryza punctata OPUNC08G01110 I 0.891
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.897
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I 0.891
OS06G0131700 Oryza sativa OS06G0131700 D 0.897
OS08G0115800 Oryza sativa OS08G0115800 I 0.891
Pavir.J07835 Panicum virgatum Pavir.J07835 I 0.887
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.891
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.891
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.904
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.879
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I 0.922
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.876
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I 0.926
Pm018292 Prunus mume Pm018292 I 0.927
Pm024260 Prunus mume Pm024260 I 0.872
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.872
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I 0.927
27964.m000369 Ricinus communis 27964.m000369 I 0.923
30068.m002591 Ricinus communis 30068.m002591 I 0.872
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I 0.934
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.876
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I 0.925
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.879
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.879
Si006565m.g Setaria italica Si006565m.g I 0.887
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.891
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.888
TCM_005047 Theobroma cacao TCM_005047 I 0.923
TCM_015621 Theobroma cacao TCM_015621 I 0.872
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.891
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.891
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.907
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.909
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.883
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.891
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.888