CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.008G014700
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.008G014700
T298121_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G014700.1
NAC/NAM
10
127
PPGFRFCPTDEELVVHFLQRKAALLPCHPDVIPDLELYPHDPWELDGKALGEGNQWYFYSRRTQKRITGNGYWKPMGIEEDVINSRSKKVGMKKYLVFYIGEGPAAIKTNWIMQEYRL
Gorai.008G014700.2
NAC/NAM
10
127
PPGFRFCPTDEELVVHFLQRKAALLPCHPDVIPDLELYPHDPWELDGKALGEGNQWYFYSRRTQKRITGNGYWKPMGIEEDVINSRSKKVGMKKYLVFYIGEGPAAIKTNWIMQEYRL
Gorai.008G014700.3
NAC/NAM
10
127
PPGFRFCPTDEELVVHFLQRKAALLPCHPDVIPDLELYPHDPWELDGKALGEGNQWYFYSRRTQKRITGNGYWKPMGIEEDVINSRSKKVGMKKYLVFYIGEGPAAIKTNWIMQEYRL
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00269
Aquilegia coerulea
Aquca_022_00269
N
0.915
ANAC104
Arabidopsis lyrata
fgenesh2_kg.8__2481__AT5G64530.1
N
0.925
NAC104
Arabidopsis thaliana
AT5G64530
N
0.925
Bostr.0568s0345
Boechera stricta
Bostr.0568s0345
N
0.925
Bo2g166280
Brassica oleracea
Bo2g166280
N
0.923
Bo3g101220
Brassica oleracea
Bo3g101220
N
0.925
Bo9g018140
Brassica oleracea
Bo9g018140
N
0.918
Bra024306
Brassica rapa
Bra024306
N
0.925
Bra031915
Brassica rapa
Bra031915
N
0.923
Bra037779
Brassica rapa
Bra037779
N
0.917
PK12901.1
Cannabis sativa
PK12901.1
N
0.886
Cagra.0248s0135
Capsella grandiflora
Cagra.0248s0135
N
0.915
Carubv10027198m.g
Capsella rubella
Carubv10027198m.g
N
0.915
Ca_05227
Cicer arietinum
Ca_05227
N
0.906
Cla009592
Citrullus lanatus
Cla009592
N
0.918
Ciclev10002538m.g
Citrus clementina
Ciclev10002538m.g
N
0.940
orange1.1g029016m.g
Citrus sinensis
orange1.1g029016m.g
N
0.940
Cucsa.345830
Cucumis sativus
Cucsa.345830
N
0.914
Eucgr.I02695
Eucalyptus grandis
Eucgr.I02695
N
0.930
Thhalv10004805m.g
Eutrema salsugineum
Thhalv10004805m.g
N
0.913
GLYMA15G05690
Glycine max
GLYMA15G05690
N
0.932
GLYMA05G24910
Glycine max
GLYMA05G24910
N
0.926
GLYMA08G08010
Glycine max
GLYMA08G08010
N
0.923
GLYMA08G19300
Glycine max
GLYMA08G19300
N
0.920
Gorai.005G217400
Gossypium raimondii
Gorai.005G217400
N
0.932
Gorai.013G063500
Gossypium raimondii
Gorai.013G063500
N
0.914
Lus10000206.g
Linum usitatissimum
Lus10000206.g
N
0.922
Lus10010747.g
Linum usitatissimum
Lus10010747.g
N
0.923
Lus10035647.g
Linum usitatissimum
Lus10035647.g
N
0.922
Lus10035648.g
Linum usitatissimum
Lus10035648.g
N
0.922
chr4.CM0337.760.nc
Lotus japonicus
chr4.CM0337.760.nc
N
0.913
chr6.CM0314.510.nd
Lotus japonicus
chr6.CM0314.510.nd
N
0.924
MDP0000250487
Malus domestica
MDP0000250487
N
0.903
MDP0000240094
Malus domestica
MDP0000240094
N
0.926
cassava1502.valid.m1
Manihot esculenta
cassava1502.valid.m1
N
0.934
MTR_4g094302
Medicago truncatula
MTR_4g094302
N
0.928
POPTR_0003s01720
Populus trichocarpa
POPTR_0003s01720
N
0.962
POPTR_0001s21440
Populus trichocarpa
POPTR_0001s21440
N
0.957
Pm004078
Prunus mume
Pm004078
N
0.930
PRUPE_ppa019508mg
Prunus persica
PRUPE_ppa019508mg
N
0.930
29683.m000467
Ricinus communis
29683.m000467
N
0.907
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.940
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.926
Solyc10g047060.1
Solanum lycopersicum
Solyc10g047060.1
N
0.881
Solyc01g104900.2
Solanum lycopersicum
Solyc01g104900.2
N
0.918
PGSC0003DMG400029741
Solanum tuberosum
PGSC0003DMG400029741
N
0.921
PGSC0003DMG400005501
Solanum tuberosum
PGSC0003DMG400005501
N
0.897
TCM_007543
Theobroma cacao
TCM_007543
I
0.954
VIT_04s0044g01500
Vitis vinifera
VIT_04s0044g01500
N
0.912
ANAC104
Vitis vinifera
VIT_12s0055g00510
N
0.918