GB40871 (Apis mellifera)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 GB40871 T313768_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bab1
M06440_2.00 		Drosophila melanogaster
AAYAWWWATA
TATWAWTRTT		 B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870 		1.000 1.000
bab1
M06441_2.00 		Drosophila melanogaster
KAATTAWATAW
WTATWTAATTM		 B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870 		1.000 1.000
bab1
M09690_2.00 		Drosophila melanogaster
AHWAYWATAWAHAT
ATDTWTATWRTWDT		 Misc
Kulakovskiy et al.(2009)
bab1 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB40871-PA Pipsqueak 28 73

Links

Other Pipsqueak family TFs
Other Apis mellifera TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_16032 Aegilops tauschii F775_16032 I
F775_24687 Aegilops tauschii F775_24687 I
F775_29256 Aegilops tauschii F775_29256 I
F775_52293 Aegilops tauschii F775_52293 I
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I
Aquca_007_00948 Aquilegia coerulea Aquca_007_00948 I
Aquca_014_00944 Aquilegia coerulea Aquca_014_00944 I
Aquca_033_00035 Aquilegia coerulea Aquca_033_00035 I
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I
anac046 Arabidopsis lyrata fgenesh2_kg.3__366__AT3G04060.1 I
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I
ANAC080 Arabidopsis lyrata fgenesh2_kg.6__736__AT5G07680.1 D
ATNAC2 Arabidopsis lyrata fgenesh2_kg.7__3461__AT5G39610.1 I
ANAC100 Arabidopsis lyrata fgenesh2_kg.8__2118__AT5G61430.1 D
anac046 Arabidopsis thaliana AT3G04060 D
NAC59 Arabidopsis thaliana AT3G29035 D
NAC079 Arabidopsis thaliana AT5G07680 D
ANAC087 Arabidopsis thaliana AT5G18270 D
NAC92 Arabidopsis thaliana AT5G39610 D
NAC098 Arabidopsis thaliana AT5G53950 D
NAC100 Arabidopsis thaliana AT5G61430 D
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.10058s0039 Boechera stricta Bostr.10058s0039 I
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I
Bostr.2570s0302 Boechera stricta Bostr.2570s0302 I
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I
BRADI1G63630 Brachypodium distachyon BRADI1G63630 I
BRADI4G34157 Brachypodium distachyon BRADI4G34157 I
Bo00578s090 Brassica oleracea Bo00578s090 I
Bo2g008760 Brassica oleracea Bo2g008760 I
Bo2g015440 Brassica oleracea Bo2g015440 I
Bo2g043280 Brassica oleracea Bo2g043280 I
Bo2g161570 Brassica oleracea Bo2g161570 I
Bo3g013050 Brassica oleracea Bo3g013050 I
Bo5g148430 Brassica oleracea Bo5g148430 I
Bo6g062160 Brassica oleracea Bo6g062160 I
Bo7g087220 Brassica oleracea Bo7g087220 I
Bo7g098620 Brassica oleracea Bo7g098620 I
Bo9g008770 Brassica oleracea Bo9g008770 I
Bo9g113820 Brassica oleracea Bo9g113820 I
Bo9g157320 Brassica oleracea Bo9g157320 I
Bo9g175670 Brassica oleracea Bo9g175670 I
Bra002148 Brassica rapa Bra002148 I
Bra006449 Brassica rapa Bra006449 I
Bra009246 Brassica rapa Bra009246 I
Bra012960 Brassica rapa Bra012960 I
Bra022685 Brassica rapa Bra022685 I
Bra023669 Brassica rapa Bra023669 I
Bra025374 Brassica rapa Bra025374 I
Bra025658 Brassica rapa Bra025658 I
Bra028435 Brassica rapa Bra028435 I
Bra028685 Brassica rapa Bra028685 I
Bra029313 Brassica rapa Bra029313 I
Bra031950 Brassica rapa Bra031950 I
Bra036223 Brassica rapa Bra036223 I
PK13860.1 Cannabis sativa PK13860.1 I
PK26741.1 Cannabis sativa PK26741.1 I
Cagra.0542s0037 Capsella grandiflora Cagra.0542s0037 I
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I
Cagra.2026s0002 Capsella grandiflora Cagra.2026s0002 I
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I
Cagra.6981s0001 Capsella grandiflora Cagra.6981s0001 I
Carubv10001372m.g Capsella rubella Carubv10001372m.g I
Carubv10001373m.g Capsella rubella Carubv10001373m.g I
Carubv10005201m.g Capsella rubella Carubv10005201m.g I
Carubv10014118m.g Capsella rubella Carubv10014118m.g I
Carubv10026752m.g Capsella rubella Carubv10026752m.g I
Carubv10028330m.g Capsella rubella Carubv10028330m.g I
evm.TU.supercontig_111.22 Carica papaya evm.TU.supercontig_111.22 I
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I
evm.TU.supercontig_14.101 Carica papaya evm.TU.supercontig_14.101 I
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I
Ca_08255 Cicer arietinum Ca_08255 I
Ca_19144 Cicer arietinum Ca_19144 I
Ca_22370 Cicer arietinum Ca_22370 I
Ca_22532 Cicer arietinum Ca_22532 I
Cla010484 Citrullus lanatus Cla010484 I
Cla012339 Citrullus lanatus Cla012339 I
Cla017258 Citrullus lanatus Cla017258 I
Cla023717 Citrullus lanatus Cla023717 I
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I
Ciclev10020549m.g Citrus clementina Ciclev10020549m.g I
orange1.1g016542m.g Citrus sinensis orange1.1g016542m.g I
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I
Cucsa.002980 Cucumis sativus Cucsa.002980 I
Cucsa.122890 Cucumis sativus Cucsa.122890 I
Cucsa.338700 Cucumis sativus Cucsa.338700 I
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I
Eucgr.B00529 Eucalyptus grandis Eucgr.B00529 I
Eucgr.I01958 Eucalyptus grandis Eucgr.I01958 I
Eucgr.K01472 Eucalyptus grandis Eucgr.K01472 I
Thhalv10004550m.g Eutrema salsugineum Thhalv10004550m.g I
Thhalv10004583m.g Eutrema salsugineum Thhalv10004583m.g I
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I
Thhalv10021125m.g Eutrema salsugineum Thhalv10021125m.g I
Thhalv10027874m.g Eutrema salsugineum Thhalv10027874m.g I
gene00971-v1.0-hybrid Fragaria vesca gene00971-v1.0-hybrid I
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I
GLYMA02G07760 Glycine max GLYMA02G07760 I
GLYMA04G33270 Glycine max GLYMA04G33270 I
GLYMA05G00930 Glycine max GLYMA05G00930 I
GLYMA06G21020 Glycine max GLYMA06G21020 I
GLYMA06G35660 Glycine max GLYMA06G35660 I
GLYMA09G37050 Glycine max GLYMA09G37050 I
GLYMA12G26190 Glycine max GLYMA12G26190 I
GLYMA12G35530 Glycine max GLYMA12G35530 I
GLYMA13G05540 Glycine max GLYMA13G05540 I
GLYMA13G34950 Glycine max GLYMA13G34950 I
GLYMA16G04720 Glycine max GLYMA16G04720 I
GLYMA17G10970 Glycine max GLYMA17G10970 I
GLYMA18G49620 Glycine max GLYMA18G49620 I
GLYMA19G02850 Glycine max GLYMA19G02850 I
GLYMA19G28515 Glycine max GLYMA19G28515 I
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I
Gorai.007G038100 Gossypium raimondii Gorai.007G038100 I
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I
MLOC_64057 Hordeum vulgare MLOC_64057 N
MLOC_68185 Hordeum vulgare MLOC_68185 I
MLOC_72737 Hordeum vulgare MLOC_72737 I
LPERR06G12840 Leersia perrieri LPERR06G12840 I
LPERR09G11330 Leersia perrieri LPERR09G11330 I
Lus10003435.g Linum usitatissimum Lus10003435.g I
Lus10005537.g Linum usitatissimum Lus10005537.g I
Lus10026879.g Linum usitatissimum Lus10026879.g I
Lus10041924.g Linum usitatissimum Lus10041924.g I
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I
MDP0000129335 Malus domestica MDP0000129335 I
MDP0000135860 Malus domestica MDP0000135860 I
MDP0000184069 Malus domestica MDP0000184069 I
MDP0000232050 Malus domestica MDP0000232050 I
MDP0000276765 Malus domestica MDP0000276765 I
MDP0000310981 Malus domestica MDP0000310981 I
MDP0000911724 Malus domestica MDP0000911724 I
cassava1757.valid.m1 Manihot esculenta cassava1757.valid.m1 I
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I
cassava25877.m1 Manihot esculenta cassava25877.m1 I
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I
cassava44869.m1 Manihot esculenta cassava44869.m1 I
MTR_2g078700 Medicago truncatula MTR_2g078700 I
MTR_3g435150 Medicago truncatula MTR_3g435150 I
MTR_4g108760 Medicago truncatula MTR_4g108760 I
MTR_6g012670 Medicago truncatula MTR_6g012670 I
MTR_6g032770 Medicago truncatula MTR_6g032770 I
MTR_7g085260 Medicago truncatula MTR_7g085260 I
mgf003818m Mimulus guttatus mgf003818m I
mgf017639m Mimulus guttatus mgf017639m I
mgf023988m Mimulus guttatus mgf023988m I
GSMUA_Achr10G05070_001 Musa acuminata GSMUA_Achr10G05070_001 I
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I
GSMUA_Achr10G26180_001 Musa acuminata GSMUA_Achr10G26180_001 I
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I
GSMUA_Achr7G18330_001 Musa acuminata GSMUA_Achr7G18330_001 I
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I
OBART01G00360 Oryza barthii OBART01G00360 I
OBART01G16620 Oryza barthii OBART01G16620 I
OBART06G13940 Oryza barthii OBART06G13940 I
OBART09G15220 Oryza barthii OBART09G15220 I
OB01G10300 Oryza brachyantha OB01G10300 I
OB06G22100 Oryza brachyantha OB06G22100 I
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I
BGIOSGA001578 Oryza indica BGIOSGA001578 I
BGIOSGA002597 Oryza indica BGIOSGA002597 I
BGIOSGA022861 Oryza indica BGIOSGA022861 I
BGIOSGA029508 Oryza indica BGIOSGA029508 I
OLONG_009674 Oryza longistaminata OLONG_009674 I
OLONG_019251 Oryza longistaminata OLONG_019251 I
OLONG_022415 Oryza longistaminata OLONG_022415 I
OMERI01G15210 Oryza meridionalis OMERI01G15210 I
OMERI01G15230 Oryza meridionalis OMERI01G15230 I
OMERI07G04410 Oryza meridionalis OMERI07G04410 I
ONIVA01G00280 Oryza nivara ONIVA01G00280 I
ONIVA01G18370 Oryza nivara ONIVA01G18370 I
ONIVA03G33370 Oryza nivara ONIVA03G33370 I
ONIVA09G15800 Oryza nivara ONIVA09G15800 I
OPUNC01G00320 Oryza punctata OPUNC01G00320 I
OPUNC06G13130 Oryza punctata OPUNC06G13130 I
OPUNC09G13640 Oryza punctata OPUNC09G13640 I
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I
OS01G0104500 Oryza sativa OS01G0104500 I
OS01G0393100 Oryza sativa OS01G0393100 I
OS06G0344900 Oryza sativa OS06G0344900 I
OS09G0497900 Oryza sativa OS09G0497900 I
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I
Pavir.Eb00976 Panicum virgatum Pavir.Eb00976 I
Pavir.Ib01526 Panicum virgatum Pavir.Ib01526 I
Pavir.J00978 Panicum virgatum Pavir.J00978 I
Pavir.J02772 Panicum virgatum Pavir.J02772 I
Pavir.J13094 Panicum virgatum Pavir.J13094 I
Pavir.J21394 Panicum virgatum Pavir.J21394 I
Pavir.J27836 Panicum virgatum Pavir.J27836 N
Pavir.J39049 Panicum virgatum Pavir.J39049 I
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I
e_gw1.227.43.1 Physcomitrella patens e_gw1.227.43.1 I
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I
POPTR_0013s05110 Populus trichocarpa POPTR_0013s05110 I
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I
Pm011397 Prunus mume Pm011397 I
Pm015914 Prunus mume Pm015914 I
Pm024887 Prunus mume Pm024887 I
Pm025307 Prunus mume Pm025307 I
PRUPE_ppa005770mg Prunus persica PRUPE_ppa005770mg I
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I
PRUPE_ppa007883mg Prunus persica PRUPE_ppa007883mg I
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I
27950.m000105 Ricinus communis 27950.m000105 I
28649.m000212 Ricinus communis 28649.m000212 I
29950.m001171 Ricinus communis 29950.m001171 I
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I
SapurV1A.0867s0130 Salix purpurea SapurV1A.0867s0130 I
SapurV1A.1196s0010 Salix purpurea SapurV1A.1196s0010 I
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I
Si002074m.g Setaria italica Si002074m.g I
Si007886m.g Setaria italica Si007886m.g I
Si030187m.g Setaria italica Si030187m.g I
Si030284m.g Setaria italica Si030284m.g N
Solyc02g088180.2 Solanum lycopersicum Solyc02g088180.2 I
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I
PGSC0003DMG400001338 Solanum tuberosum PGSC0003DMG400001338 I
Sb01g036590 Sorghum bicolor Sb01g036590 I
Sb02g028870 Sorghum bicolor Sb02g028870 I
Sb08g006330 Sorghum bicolor Sb08g006330 I
TCM_014073 Theobroma cacao TCM_014073 I
TCM_018621 Theobroma cacao TCM_018621 I
TCM_026028 Theobroma cacao TCM_026028 I
TCM_031619 Theobroma cacao TCM_031619 I
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I
Traes_3DS_930F3B5AD Triticum aestivum Traes_3DS_930F3B5AD I
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I
Traes_5BL_59AFA4B01 Triticum aestivum Traes_5BL_59AFA4B01 I
TRIUR3_14541 Triticum urartu TRIUR3_14541 N
TRIUR3_20591 Triticum urartu TRIUR3_20591 I
TRIUR3_23644 Triticum urartu TRIUR3_23644 I
TRIUR3_35152 Triticum urartu TRIUR3_35152 I
VIT_08s0007g07640 Vitis vinifera VIT_08s0007g07640 I
VIT_14s0108g01070 Vitis vinifera VIT_14s0108g01070 I
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I
GRMZM2G008374 Zea mays GRMZM2G008374 I
GRMZM2G159500 Zea mays GRMZM2G159500 I
GRMZM2G386163 Zea mays GRMZM2G386163 I
GRMZM2G393433 Zea mays GRMZM2G393433 I