SMUV_0000352701 (Syphacia muris)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 SMUV_0000352701 T315130_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000352701-mRNA-1 Pipsqueak 16 61
SMUV_0000352701-mRNA-1 Pipsqueak 116 158

Links

Other Pipsqueak family TFs
Other Syphacia muris TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.793
ASU_08146 Ascaris suum ASU_08146 N 0.851
Bm5461 Brugia malayi Bm5461 N 0.828
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.828
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.805
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.828
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.953
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.805
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.805
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.816
LOAG_18975 Loa loa LOAG_18975 N 0.833
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.800
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.788
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.795
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.837
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.837
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.793
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.839
L893_g31084 Steinernema glaseri L893_g31084 N 0.795
L892_g27509 Steinernema scapterisci L892_g27509 N 0.782
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.793
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.800
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.800
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.837