NFKB2 (Cavia porcellus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSCPOG00000004847 T317077_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		1.000 1.000
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.976 0.976
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.976 0.976
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.976 0.976
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000004362 Rel 35 215

Links

Other Rel family TFs
Other Cavia porcellus TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02727 Aegilops tauschii F775_02727 I
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I
PK13330.1 Cannabis sativa PK13330.1 I
PK25269.1 Cannabis sativa PK25269.1 I
PK28640.1 Cannabis sativa PK28640.1 I
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I
Ca_00417 Cicer arietinum Ca_00417 I
Ca_10494 Cicer arietinum Ca_10494 I
Ca_16397 Cicer arietinum Ca_16397 I
Ca_25424 Cicer arietinum Ca_25424 I
Cla005054 Citrullus lanatus Cla005054 N
Cla010474 Citrullus lanatus Cla010474 I
Cla021590 Citrullus lanatus Cla021590 I
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I
Cucsa.158080 Cucumis sativus Cucsa.158080 I
Cucsa.193280 Cucumis sativus Cucsa.193280 N
Cucsa.258020 Cucumis sativus Cucsa.258020 I
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I
GLYMA03G01931 Glycine max GLYMA03G01931 I
GLYMA07G08542 Glycine max GLYMA07G08542 I
GLYMA13G05690 Glycine max GLYMA13G05690 I
GLYMA13G29920 Glycine max GLYMA13G29920 N
GLYMA15G09190 Glycine max GLYMA15G09190 N
GLYMA19G03120 Glycine max GLYMA19G03120 I
GLYMA19G03165 Glycine max GLYMA19G03165 I
GLYMA20G03890 Glycine max GLYMA20G03890 N
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I
MLOC_18783 Hordeum vulgare MLOC_18783 I
MLOC_7255 Hordeum vulgare MLOC_7255 I
LPERR09G12960 Leersia perrieri LPERR09G12960 I
LPERR12G14340 Leersia perrieri LPERR12G14340 I
Lus10008291.g Linum usitatissimum Lus10008291.g N
Lus10013764.g Linum usitatissimum Lus10013764.g I
Lus10036556.g Linum usitatissimum Lus10036556.g I
Lus10039171.g Linum usitatissimum Lus10039171.g I
Lus10041372.g Linum usitatissimum Lus10041372.g I
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N
MDP0000127123 Malus domestica MDP0000127123 N
MDP0000133476 Malus domestica MDP0000133476 I
MDP0000138669 Malus domestica MDP0000138669 I
MDP0000276536 Malus domestica MDP0000276536 I
MDP0000316843 Malus domestica MDP0000316843 N
MDP0000551969 Malus domestica MDP0000551969 I
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I
cassava28630.m1 Manihot esculenta cassava28630.m1 I
cassava40212.m1 Manihot esculenta cassava40212.m1 I
cassava47343.m1 Manihot esculenta cassava47343.m1 N
cassava4942.m1 Manihot esculenta cassava4942.m1 I
cassava9303.m1 Manihot esculenta cassava9303.m1 I
MTR_2g016730 Medicago truncatula MTR_2g016730 N
MTR_4g082345 Medicago truncatula MTR_4g082345 I
MTR_6g012970 Medicago truncatula MTR_6g012970 I
MTR_7g011630 Medicago truncatula MTR_7g011630 I
MTR_8g032610 Medicago truncatula MTR_8g032610 I
mgf018851m Mimulus guttatus mgf018851m I
mgf024137m Mimulus guttatus mgf024137m N
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I
OBART12G17080 Oryza barthii OBART12G17080 I
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I
BGIOSGA031114 Oryza indica BGIOSGA031114 I
BGIOSGA037681 Oryza indica BGIOSGA037681 I
OMERI09G12500 Oryza meridionalis OMERI09G12500 I
OMERI11G15200 Oryza meridionalis OMERI11G15200 I
ONIVA09G17920 Oryza nivara ONIVA09G17920 I
ONIVA12G15550 Oryza nivara ONIVA12G15550 I
OPUNC09G15300 Oryza punctata OPUNC09G15300 I
OPUNC12G15550 Oryza punctata OPUNC12G15550 I
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I
OS12G0582900 Oryza sativa OS12G0582900 I
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I
Pavir.J28133 Panicum virgatum Pavir.J28133 I
Pavir.J28151 Panicum virgatum Pavir.J28151 I
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I
Pm008788 Prunus mume Pm008788 I
Pm015931 Prunus mume Pm015931 I
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I
29635.m000461 Ricinus communis 29635.m000461 I
29813.m001543 Ricinus communis 29813.m001543 I
30068.m002623 Ricinus communis 30068.m002623 I
30174.m008961 Ricinus communis 30174.m008961 I
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I
Si024417m.g Setaria italica Si024417m.g I
Si032213m.g Setaria italica Si032213m.g I
Si038848m.g Setaria italica Si038848m.g I
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I
Sb01g014810 Sorghum bicolor Sb01g014810 I
Sb02g030350 Sorghum bicolor Sb02g030350 I
Sb08g019530 Sorghum bicolor Sb08g019530 I
TCM_005425 Theobroma cacao TCM_005425 I
TCM_011632 Theobroma cacao TCM_011632 I
TCM_015579 Theobroma cacao TCM_015579 I
TCM_018659 Theobroma cacao TCM_018659 I
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I
GRMZM2G010100 Zea mays GRMZM2G010100 I
GRMZM2G018138 Zea mays GRMZM2G018138 I
GRMZM2G039112 Zea mays GRMZM2G039112 I