OLONG_006342 (Oryza longistaminata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OLONG_006342 T320589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_006342-R1 RWP-RK 580 628
OLONG_006342-R2 RWP-RK 580 628

Links

Other RWP-RK family TFs
Other Oryza longistaminata TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I
AALB007752 Anopheles albimanus AALB007752 I
ACUA008762 Anopheles culicifacies ACUA008762 I
ADIR002676 Anopheles dirus ADIR002676 I
AFAF013225 Anopheles farauti AFAF013225 I
AMAM011616 Anopheles maculatus AMAM011616 I
AQUA009446 Anopheles quadriannulatus AQUA009446 I
ACEP16394 Atta cephalotes ACEP16394 I
ACEP16400 Atta cephalotes ACEP16400 I
ACEP16406 Atta cephalotes ACEP16406 I
BGIBMGA008906 Bombyx mori BGIBMGA008906 I
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I
CPIJ016825 Culex quinquefasciatus CPIJ016825 I
CPIJ006373 Culex quinquefasciatus CPIJ006373 I
KGM_21065 Danaus plexippus KGM_21065 I
runx2b Danio rerio ENSDARG00000059233 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
Gfo_R013848 Geospiza fortis Gfo_R013848 I
HMEL014739 Heliconius melpomene HMEL014739 I
HMEL009842 Heliconius melpomene HMEL009842 I
RUNX2 Homo sapiens ENSG00000124813 D
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
LCUP002647 Lucilia cuprina LCUP002647 I
LCUP002656 Lucilia cuprina LCUP002656 I
MESCA007078 Megaselia scalaris MESCA007078 I
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I
Runx2 Mus musculus ENSMUSG00000039153 D
PHUM333310 Pediculus humanus PHUM333310 I
PPAI006591 Phlebotomus papatasi PPAI006591 I
PPAI007797 Phlebotomus papatasi PPAI007797 I
SINV13405 Solenopsis invicta SINV13405 I
TC006536 Tribolium castaneum TC006536 I