S1FA1 (Arabidopsis thaliana)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 AT3G53370 T321341_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G53370.1 S1FA 11 76
AT3G53370.2 S1FA 5 38

Links

Other S1FA family TFs
Other Arabidopsis thaliana TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18881 Aegilops tauschii F775_18881 N 0.000
F775_19112 Aegilops tauschii F775_19112 N 0.000
BRADI1G57970 Brachypodium distachyon BRADI1G57970 N 0.000
BRADI4G35570 Brachypodium distachyon BRADI4G35570 N 0.000
BRADI4G35580 Brachypodium distachyon BRADI4G35580 I 0.000
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I 0.000
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.000
MLOC_74460 Hordeum vulgare MLOC_74460 I 0.000
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.000
OBART09G16830 Oryza barthii OBART09G16830 I 0.000
ORGLA09G0133100 Oryza glaberrima ORGLA09G0133100 I 0.000
ORGLA09G0133000 Oryza glaberrima ORGLA09G0133000 N 0.000
OGLUM09G17420 Oryza glumaepatula OGLUM09G17420 I 0.000
DREB1B Oryza indica BGIOSGA029417 N 0.000
DREB1H Oryza indica BGIOSGA029416 I 0.000
ONIVA09G17880 Oryza nivara ONIVA09G17880 N 0.000
ONIVA09G17890 Oryza nivara ONIVA09G17890 I 0.000
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.000
ORUFI09G18190 Oryza rufipogon ORUFI09G18190 N 0.000
ORUFI09G18200 Oryza rufipogon ORUFI09G18200 I 0.000
DREB1H Oryza sativa OS09G0522100 I 0.000
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.000
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.000
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.000
Si031001m.g Setaria italica Si031001m.g I 0.000
Si030869m.g Setaria italica Si030869m.g I 0.000
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.000
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.000
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.000
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.000
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.000
Sb02g030310 Sorghum bicolor Sb02g030310 I 0.000
Traes_5BL_0C3609EF0 Triticum aestivum Traes_5BL_0C3609EF0 N 0.000
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.000
Traes_5BL_60510E4A7 Triticum aestivum Traes_5BL_60510E4A7 I 0.000
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.000
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.000
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.000
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.000
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.000