Gorai.001G176000 (Gossypium raimondii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Gorai.001G176000 T323493_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.984 0.933
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.941 0.800
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.939 0.813
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G176000.1 SBP 176 250
Gorai.001G176000.2 SBP 176 250
Gorai.001G176000.3 SBP 176 250
Gorai.001G176000.4 SBP 176 240
Gorai.001G176000.5 SBP 176 240

Links

Other SBP family TFs
Other Gossypium raimondii TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I
GMEB2 Anolis carolinensis ENSACAG00000011613 D
Afo_R008896 Aptenodytes forsteri Afo_R008896 I
Afo_R010444 Aptenodytes forsteri Afo_R010444 I
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I
GMEB1 Bos taurus ENSBTAG00000001160 I
GMEB2 Bos taurus ENSBTAG00000014769 I
Brh_R002176 Buceros rhinoceros Brh_R002176 I
Brh_R012802 Buceros rhinoceros Brh_R012802 I
GMEB1 Callithrix jacchus ENSCJAG00000009754 I
GMEB2 Callithrix jacchus ENSCJAG00000010283 I
Aan_R005833 Calypte anna Aan_R005833 I
Aan_R015716 Calypte anna Aan_R015716 I
GMEB1 Canis familiaris ENSCAFG00000011711 I
GMEB2 Canis familiaris ENSCAFG00000013008 I
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I
GMEB2 Cavia porcellus ENSCPOG00000025567 I
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I
gmeb1 Danio rerio ENSDARG00000062060 I
GMEB2 Danio rerio ENSDARG00000093240 I
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I
GMEB1 Echinops telfairi ENSETEG00000000775 I
GMEB1 Equus caballus ENSECAG00000009764 I
GMEB2 Equus caballus ENSECAG00000019377 I
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I
GMEB1 Felis catus ENSFCAG00000018209 I
GMEB2 Felis catus ENSFCAG00000031273 I
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I
Gfo_R005287 Geospiza fortis Gfo_R005287 I
Gfo_R008934 Geospiza fortis Gfo_R008934 I
GMEB2 Gorilla gorilla ENSGGOG00000008653 I
GMEB1 Gorilla gorilla ENSGGOG00000009221 I
GMEB2 Homo sapiens ENSG00000101216 D
GMEB1 Homo sapiens ENSG00000162419 D
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I
GMEB1 Loxodonta africana ENSLAFG00000011849 I
GMEB2 Loxodonta africana ENSLAFG00000012335 I
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I
ENSP00000381890 Macaca fascicularis ENSP00000381890 I
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I
GMEB1 Macaca mulatta ENSMMUG00000011390 I
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D
GMEB2 Microcebus murinus ENSMICG00000010614 I
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D
GMEB2 Monodelphis domestica ENSMODG00000016974 I
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I
Gmeb1 Mus musculus ENSMUSG00000028901 D
Gmeb2 Mus musculus ENSMUSG00000038705 D
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I
GMEB1 Myotis lucifugus ENSMLUG00000012602 I
GMEB2 Myotis lucifugus ENSMLUG00000014606 I
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I
Ogr01986 Ophisaurus gracilis Ogr01986 I
Ogr06841 Ophisaurus gracilis Ogr06841 I
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I
gmeb1 Oryzias latipes ENSORLG00000008294 I
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I
GMEB2 Otolemur garnettii ENSOGAG00000008826 I
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I
GMEB1 Pan troglodytes ENSPTRG00000000438 I
GMEB2 Pan troglodytes ENSPTRG00000013744 I
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I
Pvit_01323 Pogona vitticeps Pvit_01323 I
Pvit_15570 Pogona vitticeps Pvit_15570 I
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I
GMEB2 Procavia capensis ENSPCAG00000000522 I
GMEB1 Procavia capensis ENSPCAG00000005575 I
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I
GMEB1 Takifugu rubripes ENSTRUG00000011964 I
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I
GMEB1 Tursiops truncatus ENSTTRG00000013602 I
Tal_R007596 Tyto alba Tal_R007596 I
GMEB1 Vicugna pacos ENSVPAG00000006781 I
AAH84751 Xenopus laevis AAH84751 I
gmeb1.S Xenopus laevis XB-GENE-1002174 D
gmeb2.S Xenopus laevis XB-GENE-5755500 I
gmeb1 Xenopus tropicalis XB-GENE-1002169 D
gmeb2 Xenopus tropicalis XB-GENE-5755487 I
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I