CPIJ013913 (Culex quinquefasciatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CPIJ013913 T327199_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pan
M06451_2.00 		Drosophila melanogaster
DWYCAAAD
HTTTGRWH		 B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432 		0.667 0.884
pan
M08428_2.00 		Drosophila melanogaster
WHNAAAVRNRSCGM
KCGSYNYBTTTNDW		 ChIP-chip
Mathelier et al.(2014)
MA0237.2 		0.667 0.884
pan
M11337_2.00 		Drosophila melanogaster
AAGATCAAAGG
CCTTTGATCTT		 Transfac
Matys et al.(2006)
I$TCF_1 		0.667 0.884
pan
M11338_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TCF_Q6 		0.667 0.884
Tcf7l1
M00207_2.00 		Mus musculus
NNNNWWDN
NHWWNNNN		 PBM
Badis et al.(2009)
Tcf3_3787 		0.647 0.826
TCF7L1
M03512_2.00 		Homo sapiens
AAAGATCAAAGG
CCTTTGATCTTT		 SELEX
Jolma et al.(2013)
TCF7L1_1 		0.647 0.826
TCF7L1
M05779_2.00 		Homo sapiens
RSATCAAAG
CTTTGATSY		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1 		0.647 0.826
TCF7L1
M05780_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2 		0.647 0.826
TCF7L1
M09395_2.00 		Homo sapiens
NBBCTTTGAWSTB
VASWTCAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B 		0.647 0.826
Tcf7l1
M09406_2.00 		Mus musculus
BBCTTTGAWST
ASWTCAAAGVV		 Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A 		0.647 0.826
Tcf7l1
M09407_2.00 		Mus musculus
NDGCAGSTGBB
VVCASCTGCHN		 Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A 		0.647 0.826
TCF7L1
M11320_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_01 		0.647 0.826
TCF7L1
M11321_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6_01 		0.647 0.826
TCF7L1
M11322_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6 		0.647 0.826
TCF7L1
M05781_2.00 		Homo sapiens
CTTTGATSY
RSATCAAAG		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1 		0.647 0.826
TCF7L1
M05782_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2 		0.647 0.826
Tcf7l2
M00198_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Tcf7l2_3461 		0.647 0.826
Tcf7l2
M02646_2.00 		Mus musculus
SATCAAAGN
NCTTTGATS		 SELEX
Hallikas et al.(2006)
Tcf4 		0.647 0.826
TCF7L2
M08167_2.00 		Homo sapiens
NVASWTCAAAGVVN
NBBCTTTGAWSTBN		 ChIP-seq
Mathelier et al.(2014)
MA0523.1 		0.647 0.826
TCF7L2
M09393_2.00 		Homo sapiens
DGCAGSTGKS
SMCASCTGCH		 Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C 		0.647 0.826
TCF7L2
M09394_2.00 		Homo sapiens
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A 		0.647 0.826
Tcf7l2
M09401_2.00 		Mus musculus
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A 		0.647 0.826
TCF7L2
M09638_2.00 		Homo sapiens
CCTTTGAWST
ASWTCAAAGG		 Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196 		0.647 0.826
TCF7L2
M11316_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_01 		0.647 0.826
TCF7L2
M11317_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_02 		0.647 0.826
TCF7L2
M11318_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5 		0.647 0.826
TCF7L2
M11319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF7L2_06 		0.647 0.826
Lef1
M00200_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Lef1_3504 		0.647 0.812
LEF1
M03511_2.00 		Homo sapiens
NRAGATCAAAGRVWW
WWBYCTTTGATCTYN		 SELEX
Jolma et al.(2013)
LEF1_1 		0.647 0.812
LEF1
M05771_2.00 		Homo sapiens
NSATCAAAS
STTTGATSN		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1 		0.647 0.812
LEF1
M05772_2.00 		Homo sapiens
WCATCGRGRCGCTGW
WCAGCGYCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2 		0.647 0.812
LEF1
M05775_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1 		0.647 0.812
LEF1
M05776_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2 		0.647 0.812
LEF1
M05895_2.00 		Homo sapiens
WTCAAAGNNN
NNNCTTTGAW		 SMiLE-seq
Isakova et al.(2017)
LEF1 		0.647 0.812
LEF1
M09392_2.00 		Homo sapiens
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A 		0.647 0.812
Lef1
M09402_2.00 		Mus musculus
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B 		0.647 0.812
LEF1
M11311_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q2_01 		0.647 0.812
LEF1
M11312_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q3 		0.647 0.812
LEF1
M11313_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q4 		0.647 0.812
LEF1
M11314_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5_01 		0.647 0.812
LEF1
M11315_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5 		0.647 0.812
LEF1
M05773_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1 		0.647 0.812
LEF1
M05774_2.00 		Homo sapiens
WCATCGRGGCGCTGW
WCAGCGCCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2 		0.647 0.812
LEF1
M05777_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1 		0.647 0.812
LEF1
M05778_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2 		0.647 0.812
Tcf7
M00193_2.00 		Mus musculus
HNHNNNNNN
NNNNNNDND		 PBM
Badis et al.(2009)
Tcf7_0950 		0.621 0.812
Tcf7
M03532_2.00 		Mus musculus
AAASATCAAAGV
BCTTTGATSTTT		 SELEX
Jolma et al.(2013)
Tcf7_1 		0.621 0.812
TCF7
M05755_2.00 		Homo sapiens
DSATCAAWS
SWTTGATSH		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1 		0.621 0.812
TCF7
M05756_2.00 		Homo sapiens
WCWKCGYCYCGWTGW
WCAWCGRGRCGMWGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2 		0.621 0.812
TCF7
M05890_2.00 		Homo sapiens
NNASATCAAASNN
NNSTTTGATSTNN		 SMiLE-seq
Isakova et al.(2017)
TCF7 		0.621 0.812
TCF7
M09386_2.00 		Homo sapiens
NBBCTTTSAWSTBNBN
NVNVASWTSAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A 		0.621 0.812
Tcf7
M09400_2.00 		Mus musculus
VVRVADSAAARVVVNV
BNBBBYTTTSHTBYBB		 Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A 		0.621 0.812
TCF7
M11294_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5_01 		0.621 0.812
TCF7
M11295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5 		0.621 0.812
TCF7
M05757_2.00 		Homo sapiens
RSATCAAAS
STTTGATSY		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1 		0.621 0.812
TCF7
M05758_2.00 		Homo sapiens
WCAWCGRGRCGMWGW
WCWKCGYCYCGWTGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2 		0.621 0.812
pop-1
M00712_2.00 		Caenorhabditis elegans
NNHDWVNNNN
NNNNBWHDNN		 PBM
Narasimhan et al.(2015)
pTH9135 		0.477 0.478
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ013913-PA Sox 314 382

Links

Other Sox family TFs
Other Culex quinquefasciatus TFs

507 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI004978 Acyrthosiphon pisum ACYPI004978 N
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N
AALB009551 Anopheles albimanus AALB009551 N
AARA006496 Anopheles arabiensis AARA006496 N
AATE004647 Anopheles atroparvus AATE004647 N
ACHR006211 Anopheles christyi ACHR006211 N
ACOM033657 Anopheles coluzzii ACOM033657 N
ACUA025632 Anopheles culicifacies ACUA025632 N
ADAC005840 Anopheles darlingi ADAC005840 N
AEPI009418 Anopheles epiroticus AEPI009418 N
AEPI010254 Anopheles epiroticus AEPI010254 N
AFAF001135 Anopheles farauti AFAF001135 N
AFUN001272 Anopheles funestus AFUN001272 N
AFUN005717 Anopheles funestus AFUN005717 N
AGAP001099 Anopheles gambiae AGAP001099 N
AMAM014030 Anopheles maculatus AMAM014030 N
AMAM022417 Anopheles maculatus AMAM022417 N
AMEC012325 Anopheles melas AMEC012325 N
AMIN002364 Anopheles minimus AMIN002364 N
AMIN005634 Anopheles minimus AMIN005634 N
AQUA001810 Anopheles quadriannulatus AQUA001810 N
ASIS018375 Anopheles sinensis ASIS018375 N
ASTEI10740 Anopheles stephensi ASTEI10740 N
GB43084 Apis mellifera GB43084 I
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N
ASU_00726 Ascaris suum ASU_00726 N
ASU_00939 Ascaris suum ASU_00939 N
BGLB013626 Biomphalaria glabrata BGLB013626 N
BGIBMGA006848 Bombyx mori BGIBMGA006848 I
BGIBMGA010711 Bombyx mori BGIBMGA010711 N
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N
Bm2393 Brugia malayi Bm2393 N
BTMF_0001478401 Brugia timori BTMF_0001478401 N
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N
CBN07735 Caenorhabditis brenneri CBN07735 N
CBN15844 Caenorhabditis brenneri CBN15844 N
CBN31697 Caenorhabditis brenneri CBN31697 N
CBG11867 Caenorhabditis briggsae CBG11867 N
pbrm-1 Caenorhabditis elegans WBGene00007042 N
CJA03316 Caenorhabditis japonica CJA03316 N
CJA30740 Caenorhabditis japonica CJA30740 N
CRE14258 Caenorhabditis remanei CRE14258 N
CGI_10017717 Crassostrea gigas CGI_10017717 I
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N
CpipJ_CPIJ007271 Culex pipiens CpipJ_CPIJ007271 N
CPIJ003178 Culex quinquefasciatus CPIJ003178 N
CPIJ007271 Culex quinquefasciatus CPIJ007271 N
KGM_14572 Danaus plexippus KGM_14572 I
tox4b Danio rerio ENSDARG00000100163 I
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I
YQE_05481 Dendroctonus ponderosae YQE_05481 N
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N
GG12321 Drosophila erecta FBgn0104611 N
polybromo Drosophila melanogaster FBgn0039227 N
GI24041 Drosophila mojavensis FBgn0146764 N
GL13862 Drosophila persimilis FBgn0151467 N
GA10956 Drosophila pseudoobscura FBgn0071012 N
GM22062 Drosophila sechellia FBgn0176933 N
GK13168 Drosophila willistoni FBgn0215177 N
GE10775 Drosophila yakuba FBgn0228617 N
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I
tox2 Gasterosteus aculeatus ENSGACG00000006914 N
tox4a Gasterosteus aculeatus ENSGACG00000014107 I
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I
HCOI00076900 Haemonchus contortus HCOI00076900 N
HCOI01215700 Haemonchus contortus HCOI01215700 N
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N
HMEL005034 Heliconius melpomene HMEL005034 I
HMEL006186 Heliconius melpomene HMEL006186 N
HelroG145107 Helobdella robusta HelroG145107 N
ISCW005293 Ixodes scapularis ISCW005293 N
ISCW015985 Ixodes scapularis ISCW015985 N
LDEC007066 Leptinotarsa decemlineata LDEC007066 N
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N
LOAG_15875 Loa loa LOAG_15875 N
LotgiG109021 Lottia gigantea LotgiG109021 I
LCUP007789 Lucilia cuprina LCUP007789 N
LLOJ004028 Lutzomyia longipalpis LLOJ004028 N
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N
MESCA007902 Megaselia scalaris MESCA007902 N
MCINX005468 Melitaea cinxia MCINX005468 I
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 N
snap_masked-nMf.1.1.scaf06721-processed-gene-0.5 Meloidogyne floridensis snap_masked-nMf.1.1.scaf06721-processed-gene-0.5 N
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N
MDOA008474 Musca domestica MDOA008474 N
NV10488 Nasonia vitripennis NV10488 I
NECAME_01599 Necator americanus NECAME_01599 N
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N
WBGene00238178 Onchocerca volvulus WBGene00238178 N
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N
tox2 Oryzias latipes ENSORLG00000004818 N
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N
PPAI002532 Phlebotomus papatasi PPAI002532 N
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N
RPRC014309 Rhodnius prolixus RPRC014309 N
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N
TOX2 Sorex araneus ENSSARG00000001080 N
L596_g8243 Steinernema carpocapsae L596_g8243 N
L889_g13125 Steinernema feltiae L889_g13125 N
L893_g19156 Steinernema glaseri L893_g19156 N
L898_g14011 Steinernema monticolum L898_g14011 N
L892_g19322 Steinernema scapterisci L892_g19322 N
SMAR009325 Strigamia maritima SMAR009325 N
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N
SMUV_0000135001 Syphacia muris SMUV_0000135001 N
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N
tox2 Takifugu rubripes ENSTRUG00000013848 N
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N
tetur21g01330 Tetranychus urticae tetur21g01330 N
tetur31g00660 Tetranychus urticae tetur31g00660 N
tetur31g00840 Tetranychus urticae tetur31g00840 N
tetur31g01070 Tetranychus urticae tetur31g01070 N
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N
TCNE_0000652201 Toxocara canis TCNE_0000652201 N
TC000618 Tribolium castaneum TC000618 N
TC012723 Tribolium castaneum TC012723 I
D917_05046 Trichinella nativa D917_05046 N
D917_05048 Trichinella nativa D917_05048 N
EFV52201 Trichinella spiralis EFV52201 N
EFV56090 Trichinella spiralis EFV56090 N
EFV56095 Trichinella spiralis EFV56095 N
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N
D918_03887 Trichuris suis D918_03887 N
D918_05288 Trichuris suis D918_05288 N
D918_06015 Trichuris suis D918_06015 N
D918_09264 Trichuris suis D918_09264 N
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N
WUBG_00348 Wuchereria bancrofti WUBG_00348 N
tox4.S Xenopus laevis XB-GENE-993810 I
XP_002936155 Xenopus tropicalis XP_002936155 N
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N
L798_00437 Zootermopsis nevadensis L798_00437 N