stat1 (Xenopus tropicalis)
STAT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02864 (STAT_bind) IPR013801 XB-GENE-482166 T337885_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STAT1
M08171_2.00 		Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD		 ChIP-seq
Mathelier et al.(2014)
MA0137.3 		0.882 0.882
STAT1
M08013_2.00 		Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford 		0.882 0.882
STAT1
M08014_2.00 		Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR		 ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford 		0.882 0.882
STAT1
M08229_2.00 		Homo sapiens
NTTCYNRGAA
TTCYNRGAAN		 ChIP-seq
Contrino et al.(2012)
Mv124 		0.882 0.882
STAT1
M08230_2.00 		Homo sapiens
RGTTTCRBTT
AAVYGAAACY		 ChIP-seq
Contrino et al.(2012)
Mv125 		0.882 0.882
STAT1
M09411_2.00 		Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD		 Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A 		0.882 0.882
STAT1
M09642_2.00 		Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN		 Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782 		0.882 0.882
STAT1
M11348_2.00 		Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN		 Transfac
Matys et al.(2006)
V$STAT1_01 		0.882 0.882
STAT1
M11349_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_02 		0.882 0.882
STAT1
M11350_2.00 		Homo sapiens
VNHTTMBN
NVKAADNB		 Transfac
Matys et al.(2006)
V$STAT1_03 		0.882 0.882
STAT1
M11351_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_05 		0.882 0.882
STAT1
M11352_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_07 		0.882 0.882
STAT1
M11353_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_Q4 		0.882 0.882
STAT1
M11354_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_Q6 		0.882 0.882
Stat1
M09422_2.00 		Mus musculus
HNDBYNTNDBTTTCHNTTYYYY
RRRRAANDGAAAVHNANRVHND		 Misc
Kulakovskiy et al.(2013)
STAT1_MOUSE.H11MO.0.A 		0.870 0.870
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI24010 STAT 317 567

Links

Other STAT family TFs
Other Xenopus tropicalis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I
fgenesh2_kg.8__2584__AT5G65330.1 Arabidopsis lyrata fgenesh2_kg.8__2584__AT5G65330.1 I
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I
AGL51 Arabidopsis thaliana AT4G02235 I
AGL78 Arabidopsis thaliana AT5G65330 D
AGL75 Arabidopsis thaliana AT5G41200 I
AGL43 Arabidopsis thaliana AT5G40220 I
AGL98 Arabidopsis thaliana AT5G39810 I
AGL81 Arabidopsis thaliana AT5G39750 I
AGL77 Arabidopsis thaliana AT5G38740 I
AGL105 Arabidopsis thaliana AT5G37415 I
AGL52 Arabidopsis thaliana AT4G11250 I
AGL76 Arabidopsis thaliana AT5G40120 I
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I
Bostr.3751s0043 Boechera stricta Bostr.3751s0043 I
Bostr.3751s0039 Boechera stricta Bostr.3751s0039 I
Bostr.3751s0030 Boechera stricta Bostr.3751s0030 I
Bostr.25375s0045 Boechera stricta Bostr.25375s0045 I
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I
Bo00615s090 Brassica oleracea Bo00615s090 I
Bra031864 Brassica rapa Bra031864 I
Cagra.1681s0033 Capsella grandiflora Cagra.1681s0033 I
Carubv10006654m.g Capsella rubella Carubv10006654m.g I
Carubv10007456m.g Capsella rubella Carubv10007456m.g I
Carubv10007591m.g Capsella rubella Carubv10007591m.g I
Carubv10015354m.g Capsella rubella Carubv10015354m.g I
Carubv10015986m.g Capsella rubella Carubv10015986m.g I
Thhalv10005313m.g Eutrema salsugineum Thhalv10005313m.g I
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I