Eucgr.G02354 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.G02354 T344802_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.921 0.319
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.921 0.319
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.921 0.319
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.919 0.312
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G02354.1 TCP 31 110
Eucgr.G02354.1 TCP 97 154

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I
CAGL0L02013g Candida glabrata CAGL0L02013g I
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I
Kwal_8043 Kluyveromyces waltii Kwal_8043 I
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I
SU7_2018 Saccharomyces arboricola SU7_2018 I
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I
IXR1 Saccharomyces cerevisiae YKL032C D
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I
13606_Multiple Saccharomyces paradoxus 13606_Multiple I
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I
TPHA_0C04200 Tetrapisispora phaffii TPHA_0C04200 N
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I