GSPATT00035903001 (Paramecium tetraurelia)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 GSPATT00035903001 T345499_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.829
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.605
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.579
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.579
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.579
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.579
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.579
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.579
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.566
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.566
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.566
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.566
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.566
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.566
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.566
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.566
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.566
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.566
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.566
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.566
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.553
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.553
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.553
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.553
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.539
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.500
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.500
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.461
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAK66773 TCR/CxC 192 229
CAK66773 TCR/CxC 288 325

Links

Other TCR/CxC family TFs
Other Paramecium tetraurelia TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I
ASU_01867 Ascaris suum ASU_01867 I
Bm1750 Brugia malayi Bm1750 I
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I
CBN11281 Caenorhabditis brenneri CBN11281 I
CBG13470 Caenorhabditis briggsae CBG13470 I
hlh-1 Caenorhabditis elegans WBGene00001948 D
CJA13327 Caenorhabditis japonica CJA13327 I
CRE17301 Caenorhabditis remanei CRE17301 I
CapteG36721 Capitella teleta CapteG36721 I
CGI_10007380 Crassostrea gigas CGI_10007380 I
YQE_11476 Dendroctonus ponderosae YQE_11476 I
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I
HCOI02168200 Haemonchus contortus HCOI02168200 I
LDEC009949 Leptinotarsa decemlineata LDEC009949 I
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I
LOAG_16988 Loa loa LOAG_16988 I
NECAME_14163 Necator americanus NECAME_14163 I
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I
WBGene00247572 Onchocerca volvulus WBGene00247572 I
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I
Ppa-hlh-1 Pristionchus pacificus PPA08246 I
SMUV_0000995901 Syphacia muris SMUV_0000995901 I
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I
TELCIR_22290 Teladorsagia circumcincta TELCIR_22290 N
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I
TC015855 Tribolium castaneum TC015855 I
WUBG_05117 Wuchereria bancrofti WUBG_05117 I