Lus10004164.g (Linum usitatissimum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Lus10004164.g T351660_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.756 0.756
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10004164 WRC 80 120

Links

Other WRC family TFs
Other Linum usitatissimum TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01928 Aegilops tauschii F775_01928 I 0.833
AMTR_s00024p00159910 Amborella trichopoda AMTR_s00024p00159910 I 0.707
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.721
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.756
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.756
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.714
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.805
Bo3g035920 Brassica oleracea Bo3g035920 I 0.732
Bo4g191280 Brassica oleracea Bo4g191280 I 0.756
Bra000251 Brassica rapa Bra000251 I 0.732
Bra004667 Brassica rapa Bra004667 I 0.707
Bra016897 Brassica rapa Bra016897 I 0.732
PK26699.1 Cannabis sativa PK26699.1 I 0.732
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.756
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.756
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.732
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.756
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.732
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.756
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.744
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.780
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.805
Lus10021062.g Linum usitatissimum Lus10021062.g I 1.000
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.756
mgf007626m Mimulus guttatus mgf007626m I 0.707
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.721
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.756
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.732
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.756
OBART06G06800 Oryza barthii OBART06G06800 I 0.780
OB06G16230 Oryza brachyantha OB06G16230 I 0.805
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.780
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.786
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.786
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.780
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.786
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.780
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.805
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.780
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.786
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.780
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.805
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.780
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.780
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.786
OS02G0773600 Oryza sativa OS02G0773600 I 0.780
OS06G0207600 Oryza sativa OS06G0207600 I 0.786
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.762
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.762
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.756
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.756
29613.m000377 Ricinus communis 29613.m000377 I 0.732
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.756
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.756
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.756
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.732
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.732
Sb04g034665 Sorghum bicolor Sb04g034665 N 0.756
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.762
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.756
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.756
GRMZM2G134552 Zea mays GRMZM2G134552 N 0.732
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.805