PK08776.1 (Cannabis sativa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 PK08776.1 T357065_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY20
M07414_2.00 		Arabidopsis thaliana
HHHRGTCAAMGNH
DNCKTTGACYDDD		 Dap-seq
OMalley et al.(2016)
WRKY20_col_a 		0.887 0.939
Q40090_IPOBA
M11466_2.00 		Ipomoea batatas Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPF1_Q2 		0.867 0.861
WRKY3
M07381_2.00 		Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK		 Dap-seq
OMalley et al.(2016)
WRKY3_col_a 		0.860 0.800
WRKY33
M02554_2.00 		Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN		 PBM
Weirauch et al.(2014)
pTH8183 		0.857 0.843
WRKY33
M07391_2.00 		Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY33_col_a 		0.857 0.843
PK05432.1
M01324_2.00 		Cannabis sativa
NNRGTCARH
DYTGACYNN		 PBM
Lambert et al.(2019)
pTH11342 		0.856 0.835
WRKY26
M07418_2.00 		Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK		 Dap-seq
OMalley et al.(2016)
WRKY26_col_a 		0.855 0.774
WRKY26
M07419_2.00 		Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD		 Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a 		0.855 0.774
WRKY2
M02567_2.00 		Arabidopsis thaliana
BRGTCAAM
KTTGACYV		 PBM
Weirauch et al.(2014)
pTH8832 		0.853 0.826
WRKY25
M02552_2.00 		Arabidopsis thaliana
YRGTCAAM
KTTGACYR		 PBM
Weirauch et al.(2014)
pTH8810 		0.845 0.713
WRKY25
M07387_2.00 		Arabidopsis thaliana
HWWRGTCAAMR
YKTTGACYWWD		 Dap-seq
OMalley et al.(2016)
WRKY25_col_a 		0.845 0.713
WRKY25
M07388_2.00 		Arabidopsis thaliana
NNNHWRGTCAACRNH
DNYGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a 		0.845 0.713
ZAP1
M02726_2.00 		Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH		 SELEX
Mathelier et al.(2014)
MA0589.1 		0.837 0.713
ZAP1
M11463_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_01 		0.837 0.713
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK08776.1 WRKY 243 299
PK08776.1 WRKY 415 472

Links

Other WRKY family TFs
Other Cannabis sativa TFs

785 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04392 Aegilops tauschii F775_04392 I
AMTR_s00197p00030350 Amborella trichopoda AMTR_s00197p00030350 I
Aquca_026_00098 Aquilegia coerulea Aquca_026_00098 I
SPL7 Arabidopsis lyrata scaffold_601959.1 I
SPL7 Arabidopsis thaliana AT5G18830 D
Bostr.26527s0326 Boechera stricta Bostr.26527s0326 I
BRADI2G25580 Brachypodium distachyon BRADI2G25580 I
Bo00629s160 Brassica oleracea Bo00629s160 I
Bo9g154530 Brassica oleracea Bo9g154530 I
Bra002188 Brassica rapa Bra002188 I
Bra023695 Brassica rapa Bra023695 I
PK29723.1 Cannabis sativa PK29723.1 I
Cagra.0263s0012 Capsella grandiflora Cagra.0263s0012 I
Carubv10002913m.g Capsella rubella Carubv10002913m.g I
Cla022022 Citrullus lanatus Cla022022 I
Ciclev10004348m.g Citrus clementina Ciclev10004348m.g I
orange1.1g003787m.g Citrus sinensis orange1.1g003787m.g I
Cucsa.253690 Cucumis sativus Cucsa.253690 I
Eucgr.B01228 Eucalyptus grandis Eucgr.B01228 I
Thhalv10012721m.g Eutrema salsugineum Thhalv10012721m.g I
gene06692-v1.0-hybrid Fragaria vesca gene06692-v1.0-hybrid I
GLYMA13G28460 Glycine max GLYMA13G28460 I
Gorai.011G183800 Gossypium raimondii Gorai.011G183800 I
Gorai.005G056500 Gossypium raimondii Gorai.005G056500 I
LPERR05G12780 Leersia perrieri LPERR05G12780 I
Lus10012782.g Linum usitatissimum Lus10012782.g I
Lus10033993.g Linum usitatissimum Lus10033993.g I
MDP0000195461 Malus domestica MDP0000195461 I
MDP0000271587 Malus domestica MDP0000271587 I
cassava7956.valid.m1 Manihot esculenta cassava7956.valid.m1 I
cassava7955.valid.m1 Manihot esculenta cassava7955.valid.m1 I
cassava1985.valid.m1 Manihot esculenta cassava1985.valid.m1 I
MTR_2g020620 Medicago truncatula MTR_2g020620 I
mgf004695m Mimulus guttatus mgf004695m I
GSMUA_Achr9G17440_001 Musa acuminata GSMUA_Achr9G17440_001 I
GSMUA_Achr3G09190_001 Musa acuminata GSMUA_Achr3G09190_001 I
GSMUA_Achr5G26880_001 Musa acuminata GSMUA_Achr5G26880_001 I
GSMUA_Achr3G23780_001 Musa acuminata GSMUA_Achr3G23780_001 I
OBART05G16150 Oryza barthii OBART05G16150 I
OB05G24080 Oryza brachyantha OB05G24080 I
OGLUM05G17090 Oryza glumaepatula OGLUM05G17090 I
OLONG_015968 Oryza longistaminata OLONG_015968 I
ONIVA05G16770 Oryza nivara ONIVA05G16770 I
OPUNC05G14270 Oryza punctata OPUNC05G14270 I
ORUFI05G17320 Oryza rufipogon ORUFI05G17320 I
SPL9 Oryza sativa OS05G0408200 I
Pavir.J00965 Panicum virgatum Pavir.J00965 I
Pavir.J03653 Panicum virgatum Pavir.J03653 I
POPTR_0010s02710 Populus trichocarpa POPTR_0010s02710 I
POPTR_0008s20160 Populus trichocarpa POPTR_0008s20160 I
Pm008092 Prunus mume Pm008092 I
PRUPE_ppa001613mg Prunus persica PRUPE_ppa001613mg I
29726.m003959 Ricinus communis 29726.m003959 I
SapurV1A.0152s0370 Salix purpurea SapurV1A.0152s0370 I
SapurV1A.0407s0040 Salix purpurea SapurV1A.0407s0040 I
Si021754m.g Setaria italica Si021754m.g I
Solyc01g080670.2 Solanum lycopersicum Solyc01g080670.2 I
PGSC0003DMG401006284 Solanum tuberosum PGSC0003DMG401006284 I
Sb09g020110 Sorghum bicolor Sb09g020110 I
TCM_021101 Theobroma cacao TCM_021101 I
Traes_1BL_8709BB152 Triticum aestivum Traes_1BL_8709BB152 I
SPL7 Vitis vinifera VIT_05s0020g02160 I
GRMZM2G109354 Zea mays GRMZM2G109354 I