CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M413DRAFT_310281
(
Hebeloma cylindrosporum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
M413DRAFT_310281
T372619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.605
0.727
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM46288
Zinc cluster
33
67
LSCAECRRLKLKCDKKLPCSSCVRRGCPSICPNGS
Links
Other
Zinc cluster
family TFs
Other
Hebeloma cylindrosporum
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_3741
Arabidopsis lyrata
Al_scaffold_0007_3741
I
0.000
scaffold_704060.1
Arabidopsis lyrata
scaffold_704060.1
I
0.000
fgenesh2_kg.8__2584__AT5G65330.1
Arabidopsis lyrata
fgenesh2_kg.8__2584__AT5G65330.1
I
0.000
fgenesh2_kg.7__3412__AT5G41200.1
Arabidopsis lyrata
fgenesh2_kg.7__3412__AT5G41200.1
I
0.000
AGL51
Arabidopsis thaliana
AT4G02235
I
0.000
AGL78
Arabidopsis thaliana
AT5G65330
D
0.000
AGL75
Arabidopsis thaliana
AT5G41200
I
0.000
AGL43
Arabidopsis thaliana
AT5G40220
I
0.000
AGL98
Arabidopsis thaliana
AT5G39810
I
0.000
AGL81
Arabidopsis thaliana
AT5G39750
I
0.000
AGL77
Arabidopsis thaliana
AT5G38740
I
0.000
AGL101
Arabidopsis thaliana
AT5G27050
I
0.000
AGL52
Arabidopsis thaliana
AT4G11250
I
0.000
AGL76
Arabidopsis thaliana
AT5G40120
I
0.000
Bostr.3751s0025
Boechera stricta
Bostr.3751s0025
I
0.000
Bostr.3751s0043
Boechera stricta
Bostr.3751s0043
I
0.000
Bostr.3751s0039
Boechera stricta
Bostr.3751s0039
I
0.000
Bostr.3751s0031
Boechera stricta
Bostr.3751s0031
I
0.000
Bostr.3751s0030
Boechera stricta
Bostr.3751s0030
I
0.000
Bostr.10058s0014
Boechera stricta
Bostr.10058s0014
I
0.000
Bostr.0568s0255
Boechera stricta
Bostr.0568s0255
I
0.000
Bra031864
Brassica rapa
Bra031864
I
0.000
Carubv10006654m.g
Capsella rubella
Carubv10006654m.g
I
0.000
Carubv10007591m.g
Capsella rubella
Carubv10007591m.g
I
0.000
Thhalv10005313m.g
Eutrema salsugineum
Thhalv10005313m.g
I
0.000
Thhalv10028184m.g
Eutrema salsugineum
Thhalv10028184m.g
I
0.000
Thhalv10028282m.g
Eutrema salsugineum
Thhalv10028282m.g
I
0.000