PFICI_10867 (Pestalotiopsis fici)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PFICI_10867 T378023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01478
M02590_2.00 		Neurospora crassa
NNCGGVNNN
NNNBCCGNN		 PBM
Weirauch et al.(2014)
pTH8961 		0.654 0.975
ANIA_04558
M02572_2.00 		Aspergillus nidulans
NHCGGRWNN
NNWYCCGDN		 PBM
Weirauch et al.(2014)
pTH8214 		0.626 0.875
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETS76993 Zinc cluster 68 107

Links

Other Zinc cluster family TFs
Other Pestalotiopsis fici TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I
Aquca_011_00050 Aquilegia coerulea Aquca_011_00050 I
ANAC083 Arabidopsis lyrata scaffold_601328.1 I
ANAC041 Arabidopsis lyrata fgenesh2_kg.4__1354__AT2G33480.1 I
NAC083 Arabidopsis thaliana AT5G13180 D
NAC041 Arabidopsis thaliana AT2G33480 I
Bostr.23794s0753 Boechera stricta Bostr.23794s0753 I
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I
Bo4g043670 Brassica oleracea Bo4g043670 I
Bo4g181990 Brassica oleracea Bo4g181990 I
Bo3g009040 Brassica oleracea Bo3g009040 I
Bo2g011120 Brassica oleracea Bo2g011120 I
Bo9g168950 Brassica oleracea Bo9g168950 I
Bra008849 Brassica rapa Bra008849 I
Bra006186 Brassica rapa Bra006186 I
Bra021856 Brassica rapa Bra021856 I
Bra023395 Brassica rapa Bra023395 I
Bra005492 Brassica rapa Bra005492 I
PK12461.1 Cannabis sativa PK12461.1 I
Cagra.0301s0034 Capsella grandiflora Cagra.0301s0034 N
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I
Carubv10023833m.g Capsella rubella Carubv10023833m.g N
Carubv10002548m.g Capsella rubella Carubv10002548m.g I
evm.TU.supercontig_99.63 Carica papaya evm.TU.supercontig_99.63 I
Cla001517 Citrullus lanatus Cla001517 I
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I
Cucsa.349370 Cucumis sativus Cucsa.349370 I
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I
Thhalv10017152m.g Eutrema salsugineum Thhalv10017152m.g I
gene06460-v1.0-hybrid Fragaria vesca gene06460-v1.0-hybrid N
GLYMA18G53954 Glycine max GLYMA18G53954 I
GLYMA08G47520 Glycine max GLYMA08G47520 I
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I
Lus10001809.g Linum usitatissimum Lus10001809.g I
Lus10002581.g Linum usitatissimum Lus10002581.g I
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I
MDP0000147080 Malus domestica MDP0000147080 I
MDP0000130686 Malus domestica MDP0000130686 N
MDP0000130123 Malus domestica MDP0000130123 I
MDP0000126517 Malus domestica MDP0000126517 I
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I
cassava37235.valid.m1 Manihot esculenta cassava37235.valid.m1 N
MTR_7g005280 Medicago truncatula MTR_7g005280 I
GSMUA_Achr10G11910_001 Musa acuminata GSMUA_Achr10G11910_001 N
GSMUA_Achr6G16560_001 Musa acuminata GSMUA_Achr6G16560_001 N
POPTR_0015s11420 Populus trichocarpa POPTR_0015s11420 N
POPTR_0012s10530 Populus trichocarpa POPTR_0012s10530 N
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I
Pm007070 Prunus mume Pm007070 I
30128.m009035 Ricinus communis 30128.m009035 I
30147.m014441 Ricinus communis 30147.m014441 N
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I
Solyc01g009860.2 Solanum lycopersicum Solyc01g009860.2 N
PGSC0003DMG400011891 Solanum tuberosum PGSC0003DMG400011891 N
TCM_008477 Theobroma cacao TCM_008477 I
TCM_014713 Theobroma cacao TCM_014713 I
ANAC083 Vitis vinifera VIT_01s0146g00280 I
VIT_17s0000g00770 Vitis vinifera VIT_17s0000g00770 N