XP_002490497.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002490497.1 T392290_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002490497.1 Zinc cluster 1 33

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N
LBD41 Arabidopsis lyrata fgenesh2_kg.3__191__AT3G02550.1 N
LBD40 Arabidopsis thaliana AT1G67100 N
LBD42 Arabidopsis thaliana AT1G68510 N
LBD41 Arabidopsis thaliana AT3G02550 N
LBD38 Arabidopsis thaliana AT3G49940 N
Bostr.1460s0172 Boechera stricta Bostr.1460s0172 N
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N
Bo1g156310 Brassica oleracea Bo1g156310 N
Bo2g055410 Brassica oleracea Bo2g055410 N
Bo3g055690 Brassica oleracea Bo3g055690 N
Bo6g106960 Brassica oleracea Bo6g106960 N
Bra004315 Brassica rapa Bra004315 N
Bra021433 Brassica rapa Bra021433 N
PK03169.1 Cannabis sativa PK03169.1 N
PK04548.1 Cannabis sativa PK04548.1 N
PK04625.1 Cannabis sativa PK04625.1 N
PK25954.1 Cannabis sativa PK25954.1 N
Cagra.1194s0049 Capsella grandiflora Cagra.1194s0049 N
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N
Carubv10000015m.g Capsella rubella Carubv10000015m.g N
Carubv10002654m.g Capsella rubella Carubv10002654m.g N
Carubv10015363m.g Capsella rubella Carubv10015363m.g N
Carubv10021721m.g Capsella rubella Carubv10021721m.g N
Carubv10022391m.g Capsella rubella Carubv10022391m.g N
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N
Ca_22996 Cicer arietinum Ca_22996 N
Cla007208 Citrullus lanatus Cla007208 N
Cla019264 Citrullus lanatus Cla019264 N
Cla020705 Citrullus lanatus Cla020705 N
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N
Cucsa.031350 Cucumis sativus Cucsa.031350 N
Cucsa.199060 Cucumis sativus Cucsa.199060 N
Cucsa.283560 Cucumis sativus Cucsa.283560 N
Eucgr.B03016 Eucalyptus grandis Eucgr.B03016 N
Eucgr.F02492 Eucalyptus grandis Eucgr.F02492 N
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N
GLYMA08G31143 Glycine max GLYMA08G31143 N
GLYMA08G48040 Glycine max GLYMA08G48040 N
GLYMA13G07590 Glycine max GLYMA13G07590 N
GLYMA18G53440 Glycine max GLYMA18G53440 N
GLYMA19G06280 Glycine max GLYMA19G06280 N
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N
MLOC_58304 Hordeum vulgare MLOC_58304 N
LPERR01G01830 Leersia perrieri LPERR01G01830 N
LPERR01G15290 Leersia perrieri LPERR01G15290 N
Lus10011530.g Linum usitatissimum Lus10011530.g N
Lus10019292.g Linum usitatissimum Lus10019292.g N
Lus10028470.g Linum usitatissimum Lus10028470.g N
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N
MDP0000136037 Malus domestica MDP0000136037 N
MDP0000233303 Malus domestica MDP0000233303 N
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N
cassava38982.m1 Manihot esculenta cassava38982.m1 N
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N
MTR_6g018270 Medicago truncatula MTR_6g018270 N
MTR_7g007010 Medicago truncatula MTR_7g007010 N
mgf010898m Mimulus guttatus mgf010898m N
mgf011656m Mimulus guttatus mgf011656m N
mgf017960m Mimulus guttatus mgf017960m N
mgf021653m Mimulus guttatus mgf021653m N
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N
GSMUA_Achr2G14600_001 Musa acuminata GSMUA_Achr2G14600_001 N
GSMUA_Achr2G22720_001 Musa acuminata GSMUA_Achr2G22720_001 N
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N
OBART01G01940 Oryza barthii OBART01G01940 N
OBART01G17510 Oryza barthii OBART01G17510 N
OB01G11830 Oryza brachyantha OB01G11830 N
OB01G27020 Oryza brachyantha OB01G27020 N
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N
BGIOSGA001546 Oryza indica BGIOSGA001546 N
BGIOSGA002703 Oryza indica BGIOSGA002703 N
OMERI01G01380 Oryza meridionalis OMERI01G01380 N
OMERI01G16320 Oryza meridionalis OMERI01G16320 N
ONIVA01G02110 Oryza nivara ONIVA01G02110 N
ONIVA01G19320 Oryza nivara ONIVA01G19320 N
OPUNC01G01670 Oryza punctata OPUNC01G01670 N
OPUNC01G18000 Oryza punctata OPUNC01G18000 N
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N
OS01G0511000 Oryza sativa OS01G0511000 N
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N
Pavir.J00526 Panicum virgatum Pavir.J00526 N
Pavir.J01483 Panicum virgatum Pavir.J01483 N
Pavir.J11724 Panicum virgatum Pavir.J11724 N
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N
Pm002404 Prunus mume Pm002404 N
Pm029059 Prunus mume Pm029059 N
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N
27524.m000293 Ricinus communis 27524.m000293 N
28207.m000107 Ricinus communis 28207.m000107 N
29661.m000902 Ricinus communis 29661.m000902 N
30170.m013752 Ricinus communis 30170.m013752 N
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N
Si002412m.g Setaria italica Si002412m.g N
Si004887m.g Setaria italica Si004887m.g N
Si022660m.g Setaria italica Si022660m.g N
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N
Solyc05g009320.2 Solanum lycopersicum Solyc05g009320.2 N
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N
PGSC0003DMG400014547 Solanum tuberosum PGSC0003DMG400014547 N
Sb01g032580 Sorghum bicolor Sb01g032580 N
Sb03g007270 Sorghum bicolor Sb03g007270 N
Sb09g025700 Sorghum bicolor Sb09g025700 N
Sb09g025710 Sorghum bicolor Sb09g025710 N
Sb09g030780 Sorghum bicolor Sb09g030780 N
TCM_000766 Theobroma cacao TCM_000766 N
TCM_009888 Theobroma cacao TCM_009888 N
TCM_012338 Theobroma cacao TCM_012338 N
TCM_019459 Theobroma cacao TCM_019459 N
Traes_2AL_450404EA6 Triticum aestivum Traes_2AL_450404EA6 N
Traes_2DL_9D8B5B436 Triticum aestivum Traes_2DL_9D8B5B436 N
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N
Traes_4BL_7F70575F9 Triticum aestivum Traes_4BL_7F70575F9 N
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N
Traes_4DL_E0847FBC5 Triticum aestivum Traes_4DL_E0847FBC5 N
VIT_01s0011g03530 Vitis vinifera VIT_01s0011g03530 N
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N
AC234149.1_FG002 Zea mays AC234149.1_FG002 N
GRMZM2G060544 Zea mays GRMZM2G060544 N
GRMZM2G073044 Zea mays GRMZM2G073044 N
GRMZM2G132693 Zea mays GRMZM2G132693 N
GRMZM2G386674 Zea mays GRMZM2G386674 N