Sb05g026843 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb05g026843 T005015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.748 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb05g026843.1 AP2 14 64

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si028135m.g Setaria italica Si028135m.g I 0.855
Si028219m.g Setaria italica Si028219m.g I 0.855
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.842
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.821
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.821
Si027485m.g Setaria italica Si027485m.g I 0.798
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.798
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.798
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.794
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.786
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.785
Si028088m.g Setaria italica Si028088m.g I 0.777
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.776
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.776
Si031946m.g Setaria italica Si031946m.g I 0.760
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.760
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.760
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.758
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.758
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.758
OB09G27130 Oryza brachyantha OB09G27130 I 0.758
OBART09G20410 Oryza barthii OBART09G20410 I 0.758
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.758
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.758
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.758
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.758
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.758
OS09G0572000 Oryza sativa OS09G0572000 I 0.758
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.758
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.758
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.756
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.756
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.756
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.756
Pavir.Ga02734 Panicum virgatum Pavir.Ga02734 N 0.753
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.750
ERF094 Arabidopsis thaliana AT1G06160 D 0.748
MTR_7g096830 Medicago truncatula MTR_7g096830 I 0.745
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.744
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.738
Ca_12221 Cicer arietinum Ca_12221 I 0.738
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.736
TRIUR3_29784 Triticum urartu TRIUR3_29784 I 0.730
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.727
Pavir.J17768 Panicum virgatum Pavir.J17768 I 0.725
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.724
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.724
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.722
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.721
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.721
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.720
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.720
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.719
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.719
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.719
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.719
TCM_020871 Theobroma cacao TCM_020871 I 0.719
Pm020604 Prunus mume Pm020604 I 0.719
MDP0000855671 Malus domestica MDP0000855671 I 0.719
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.719
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.718
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.718
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.717
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.717
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.717
Cla006080 Citrullus lanatus Cla006080 I 0.716
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.716
Cla021850 Citrullus lanatus Cla021850 I 0.715
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.715
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.715
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.715
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.714
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.714
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.713
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.713
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.712
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.712
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.712
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.712
Ca_23170 Cicer arietinum Ca_23170 I 0.712
Cla007697 Citrullus lanatus Cla007697 I 0.712
Pm009382 Prunus mume Pm009382 I 0.712
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.712
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.712
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.712
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.712
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.712
MDP0000127134 Malus domestica MDP0000127134 I 0.712
MDP0000167207 Malus domestica MDP0000167207 I 0.712
MDP0000235313 Malus domestica MDP0000235313 I 0.712
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.712
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.711
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.711
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.710
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.710
29895.m000321 Ricinus communis 29895.m000321 I 0.710
F775_22331 Aegilops tauschii F775_22331 I 0.708
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.708
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.708
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.707
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.706
F775_22020 Aegilops tauschii F775_22020 I 0.704
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.704
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.704
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.704
mgf023779m Mimulus guttatus mgf023779m I 0.704
mgf020623m Mimulus guttatus mgf020623m I 0.703
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.703
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.703
F775_22648 Aegilops tauschii F775_22648 N 0.702
F775_52314 Aegilops tauschii F775_52314 I 0.700
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.700
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.700
TCM_004052 Theobroma cacao TCM_004052 I 0.700
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.700
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.700
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.700
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.699
F775_01237 Aegilops tauschii F775_01237 N 0.697
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.697
29900.m001561 Ricinus communis 29900.m001561 I 0.697
Cla015066 Citrullus lanatus Cla015066 I 0.696
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.692
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.692
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.692
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.692
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.690
29680.m001678 Ricinus communis 29680.m001678 I 0.690
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.690
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.690
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.690
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.689
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.689
Bo5g007280 Brassica oleracea Bo5g007280 I 0.688
Bo8g114710 Brassica oleracea Bo8g114710 I 0.688
Bra032433 Brassica rapa Bra032433 I 0.688
mgf021081m Mimulus guttatus mgf021081m I 0.688
MTR_4g054860 Medicago truncatula MTR_4g054860 I 0.687
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.687
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.687
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.687
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.686
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.686
mgf022372m Mimulus guttatus mgf022372m I 0.686
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.686
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.686
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.685
OBART07G11330 Oryza barthii OBART07G11330 I 0.685
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.685
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.685
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.685
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.685
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.685
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.684
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.684
OBART07G11340 Oryza barthii OBART07G11340 I 0.684
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.684
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.684
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.684
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.684
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.684
OS07G0410700 Oryza sativa OS07G0410700 I 0.684
Si032815m.g Setaria italica Si032815m.g I 0.684
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.683
Si033089m.g Setaria italica Si033089m.g I 0.683
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.682
MTR_4g054360 Medicago truncatula MTR_4g054360 I 0.682
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.682
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.682
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.682
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.682
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.682
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.681
GLYMA19G34670 Glycine max GLYMA19G34670 I 0.681
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.681
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.681
mgf018693m Mimulus guttatus mgf018693m I 0.681
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.681
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.681
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.680
MTR_7g096780 Medicago truncatula MTR_7g096780 I 0.680
Ca_12219 Cicer arietinum Ca_12219 I 0.680
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.679
Si038911m.g Setaria italica Si038911m.g I 0.679
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.679
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.679
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.679
chr1.CM0295.160.nd Lotus japonicus chr1.CM0295.160.nd I 0.679
Bra015478 Brassica rapa Bra015478 I 0.678