CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G70860
(
Brachypodium distachyon
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
BRADI1G70860
T031618_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G70860.1
bHLH
259
302
LYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQ
Links
Other
bHLH
family TFs
Other
Brachypodium distachyon
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_67369
Hordeum vulgare
MLOC_67369
N
0.912
Traes_4AS_7530AAEB4
Triticum aestivum
Traes_4AS_7530AAEB4
N
0.912
Traes_4DL_61AE80723
Triticum aestivum
Traes_4DL_61AE80723
N
0.912
TRIUR3_01454
Triticum urartu
TRIUR3_01454
N
0.912
Traes_4BL_4B8CA74B8
Triticum aestivum
Traes_4BL_4B8CA74B8
N
0.888
BHLH54
Arabidopsis thaliana
AT1G27740
N
0.882
Bo3g142890
Brassica oleracea
Bo3g142890
N
0.882
Bo5g052310
Brassica oleracea
Bo5g052310
N
0.882
Bo7g048630
Brassica oleracea
Bo7g048630
N
0.882
Bra010921
Brassica rapa
Bra010921
N
0.882
Bra030063
Brassica rapa
Bra030063
N
0.882
Bra032846
Brassica rapa
Bra032846
N
0.882
F775_27628
Aegilops tauschii
F775_27628
N
0.882
RSL4
Arabidopsis lyrata
fgenesh2_kg.1__2933__AT1G27740.1
N
0.882
Traes_4AL_6A6EC9A6A
Triticum aestivum
Traes_4AL_6A6EC9A6A
N
0.882
Traes_4BS_9BFCC52AD
Triticum aestivum
Traes_4BS_9BFCC52AD
N
0.882
Traes_4DS_7488F4608
Triticum aestivum
Traes_4DS_7488F4608
N
0.882
Pm021172
Prunus mume
Pm021172
N
0.882
mgf019332m
Mimulus guttatus
mgf019332m
N
0.882
Bostr.15697s0100
Boechera stricta
Bostr.15697s0100
N
0.882
Cagra.1822s0081
Capsella grandiflora
Cagra.1822s0081
N
0.882
Carubv10011072m.g
Capsella rubella
Carubv10011072m.g
N
0.882
gene25555-v1.0-hybrid
Fragaria vesca
gene25555-v1.0-hybrid
N
0.882
Thhalv10009862m.g
Eutrema salsugineum
Thhalv10009862m.g
N
0.882
chr5.CM0096.500.nd
Lotus japonicus
chr5.CM0096.500.nd
N
0.882
chr5.CM0200.480.nc
Lotus japonicus
chr5.CM0200.480.nc
N
0.882
MDP0000946515
Malus domestica
MDP0000946515
N
0.881
BRADI1G22960
Brachypodium distachyon
BRADI1G22960
N
0.879
F775_02706
Aegilops tauschii
F775_02706
N
0.879
MLOC_74022
Hordeum vulgare
MLOC_74022
N
0.879
Traes_2AS_9A3F73BE3
Triticum aestivum
Traes_2AS_9A3F73BE3
N
0.879
Traes_2BS_659F9ABB9
Triticum aestivum
Traes_2BS_659F9ABB9
N
0.879
Traes_2DS_7C9C33E09
Triticum aestivum
Traes_2DS_7C9C33E09
N
0.879
TRIUR3_17670
Triticum urartu
TRIUR3_17670
N
0.879
MDP0000131874
Malus domestica
MDP0000131874
N
0.860
MTR_3g103030
Medicago truncatula
MTR_3g103030
N
0.850
AMTR_s00164p00062120
Amborella trichopoda
AMTR_s00164p00062120
N
0.847
AT2G14760
Arabidopsis thaliana
AT2G14760
N
0.847
BHLH85
Arabidopsis thaliana
AT4G33880
N
0.847
BGIOSGA023988
Oryza indica
BGIOSGA023988
N
0.847
BGIOSGA035917
Oryza indica
BGIOSGA035917
N
0.847
Bo1g007780
Brassica oleracea
Bo1g007780
N
0.847
Bo3g169400
Brassica oleracea
Bo3g169400
N
0.847
Bo7g116460
Brassica oleracea
Bo7g116460
N
0.847
Bra011476
Brassica rapa
Bra011476
N
0.847
Bra034587
Brassica rapa
Bra034587
N
0.847
Bra036969
Brassica rapa
Bra036969
N
0.847
BRADI1G14600
Brachypodium distachyon
BRADI1G14600
N
0.847
BRADI4G03070
Brachypodium distachyon
BRADI4G03070
N
0.847
F775_02582
Aegilops tauschii
F775_02582
N
0.847
RSL2
Arabidopsis lyrata
fgenesh2_kg.7__724__AT4G33880.1
N
0.847
GLYMA10G40350
Glycine max
GLYMA10G40350
N
0.847
GLYMA10G40360
Glycine max
GLYMA10G40360
N
0.847
GLYMA14G09781
Glycine max
GLYMA14G09781
N
0.847
GLYMA17G35423
Glycine max
GLYMA17G35423
N
0.847
GLYMA20G26980
Glycine max
GLYMA20G26980
N
0.847
GLYMA20G26991
Glycine max
GLYMA20G26991
N
0.847
GRMZM2G395549
Zea mays
GRMZM2G395549
N
0.847
GSMUA_Achr3G18870_001
Musa acuminata
GSMUA_Achr3G18870_001
N
0.847
GSMUA_Achr4G23240_001
Musa acuminata
GSMUA_Achr4G23240_001
N
0.847
GSMUA_Achr6G07760_001
Musa acuminata
GSMUA_Achr6G07760_001
N
0.847
LPERR07G17840
Leersia perrieri
LPERR07G17840
N
0.847
LPERR12G14550
Leersia perrieri
LPERR12G14550
N
0.847
MLOC_60270
Hordeum vulgare
MLOC_60270
N
0.847
MLOC_76486
Hordeum vulgare
MLOC_76486
N
0.847
MTR_1g018090
Medicago truncatula
MTR_1g018090
N
0.847
MTR_1g106460
Medicago truncatula
MTR_1g106460
N
0.847
MTR_1g106480
Medicago truncatula
MTR_1g106480
N
0.847
MTR_5g005110
Medicago truncatula
MTR_5g005110
N
0.847
OB07G26210
Oryza brachyantha
OB07G26210
N
0.847
OB12G24200
Oryza brachyantha
OB12G24200
N
0.847
OBART12G17400
Oryza barthii
OBART12G17400
N
0.847
OGLUM07G20330
Oryza glumaepatula
OGLUM07G20330
N
0.847
OGLUM09G03740
Oryza glumaepatula
OGLUM09G03740
N
0.847
OLONG_006157
Oryza longistaminata
OLONG_006157
N
0.847
OLONG_014997
Oryza longistaminata
OLONG_014997
N
0.847
OMERI07G17220
Oryza meridionalis
OMERI07G17220
N
0.847
OMERI12G12030
Oryza meridionalis
OMERI12G12030
N
0.847
ONIVA07G18960
Oryza nivara
ONIVA07G18960
N
0.847
ONIVA12G15960
Oryza nivara
ONIVA12G15960
N
0.847
OPUNC07G19390
Oryza punctata
OPUNC07G19390
N
0.847
OPUNC12G15720
Oryza punctata
OPUNC12G15720
N
0.847
ORGLA12G0149000
Oryza glaberrima
ORGLA12G0149000
N
0.847
ORUFI07G21430
Oryza rufipogon
ORUFI07G21430
N
0.847
ORUFI12G19280
Oryza rufipogon
ORUFI12G19280
N
0.847
OS07G0588400
Oryza sativa
OS07G0588400
N
0.847
OS12G0589000
Oryza sativa
OS12G0589000
N
0.847
PGSC0003DMG400021526
Solanum tuberosum
PGSC0003DMG400021526
N
0.847
PGSC0003DMG400036714
Solanum tuberosum
PGSC0003DMG400036714
N
0.847
POPTR_0001s30150
Populus trichocarpa
POPTR_0001s30150
N
0.847
POPTR_0002s12000
Populus trichocarpa
POPTR_0002s12000
N
0.847
POPTR_0009s09210
Populus trichocarpa
POPTR_0009s09210
N
0.847
POPTR_0014s01730
Populus trichocarpa
POPTR_0014s01730
N
0.847
PRUPE_ppa015160mg
Prunus persica
PRUPE_ppa015160mg
N
0.847
Sb01g007160
Sorghum bicolor
Sb01g007160
N
0.847
Si039720m.g
Setaria italica
Si039720m.g
N
0.847
Solyc01g107140.1
Solanum lycopersicum
Solyc01g107140.1
N
0.847
Solyc04g077960.1
Solanum lycopersicum
Solyc04g077960.1
N
0.847
TCM_007220
Theobroma cacao
TCM_007220
N
0.847
TCM_034717
Theobroma cacao
TCM_034717
N
0.847
Traes_5AS_5B9D5E067
Triticum aestivum
Traes_5AS_5B9D5E067
N
0.847
Traes_5DS_51467BEB4
Triticum aestivum
Traes_5DS_51467BEB4
N
0.847
TRIUR3_24341
Triticum urartu
TRIUR3_24341
N
0.847
VIT_03s0091g00730
Vitis vinifera
VIT_03s0091g00730
N
0.847
VIT_18s0001g09210
Vitis vinifera
VIT_18s0001g09210
N
0.847
Ca_01588
Cicer arietinum
Ca_01588
N
0.847
Ca_05644
Cicer arietinum
Ca_05644
N
0.847
Ca_11909
Cicer arietinum
Ca_11909
N
0.847
Ca_18366
Cicer arietinum
Ca_18366
N
0.847
Cla016346
Citrullus lanatus
Cla016346
N
0.847
Cla020918
Citrullus lanatus
Cla020918
N
0.847
Cla022968
Citrullus lanatus
Cla022968
N
0.847
Pm005392
Prunus mume
Pm005392
N
0.847
28152.m000914
Ricinus communis
28152.m000914
N
0.847
30170.m013749
Ricinus communis
30170.m013749
N
0.847
cassava14986.m1
Manihot esculenta
cassava14986.m1
N
0.847
cassava20440.m1
Manihot esculenta
cassava20440.m1
N
0.847
cassava25589.m1
Manihot esculenta
cassava25589.m1
N
0.847
cassava38950.m1
Manihot esculenta
cassava38950.m1
N
0.847
Cucsa.097490
Cucumis sativus
Cucsa.097490
N
0.847
Cucsa.219180
Cucumis sativus
Cucsa.219180
N
0.847
Cucsa.352750
Cucumis sativus
Cucsa.352750
N
0.847
mgf018282m
Mimulus guttatus
mgf018282m
N
0.847
mgf022238m
Mimulus guttatus
mgf022238m
N
0.847
mgf024863m
Mimulus guttatus
mgf024863m
N
0.847
Aquca_017_00066
Aquilegia coerulea
Aquca_017_00066
N
0.847
Aquca_042_00162
Aquilegia coerulea
Aquca_042_00162
N
0.847
Aquca_042_00163
Aquilegia coerulea
Aquca_042_00163
N
0.847
Bostr.2199s0029
Boechera stricta
Bostr.2199s0029
N
0.847
Bostr.7867s1234
Boechera stricta
Bostr.7867s1234
N
0.847
Cagra.1305s0010
Capsella grandiflora
Cagra.1305s0010
N
0.847
Cagra.9228s0001
Capsella grandiflora
Cagra.9228s0001
N
0.847
Carubv10006623m.g
Capsella rubella
Carubv10006623m.g
N
0.847
Carubv10015484m.g
Capsella rubella
Carubv10015484m.g
N
0.847
Ciclev10003450m.g
Citrus clementina
Ciclev10003450m.g
N
0.847
Ciclev10030309m.g
Citrus clementina
Ciclev10030309m.g
N
0.847
Eucgr.I01069
Eucalyptus grandis
Eucgr.I01069
N
0.847
evm.TU.supercontig_106.57
Carica papaya
evm.TU.supercontig_106.57
N
0.847
evm.TU.supercontig_142.14
Carica papaya
evm.TU.supercontig_142.14
N
0.847
gene02560-v1.0-hybrid
Fragaria vesca
gene02560-v1.0-hybrid
N
0.847
Gorai.005G231900
Gossypium raimondii
Gorai.005G231900
N
0.847
Gorai.009G219100
Gossypium raimondii
Gorai.009G219100
N
0.847
Gorai.010G025400
Gossypium raimondii
Gorai.010G025400
N
0.847
Lus10001068.g
Linum usitatissimum
Lus10001068.g
N
0.847
Lus10004315.g
Linum usitatissimum
Lus10004315.g
N
0.847
MDP0000145825
Malus domestica
MDP0000145825
N
0.847
MDP0000198037
Malus domestica
MDP0000198037
N
0.847
MDP0000573178
Malus domestica
MDP0000573178
N
0.847
orange1.1g036928m.g
Citrus sinensis
orange1.1g036928m.g
N
0.847
orange1.1g047654m.g
Citrus sinensis
orange1.1g047654m.g
N
0.847
Pavir.Ia00352
Panicum virgatum
Pavir.Ia00352
N
0.847
Pavir.Ia04640
Panicum virgatum
Pavir.Ia04640
N
0.847
Pavir.Ib00696
Panicum virgatum
Pavir.Ib00696
N
0.847
Pavir.J00626
Panicum virgatum
Pavir.J00626
N
0.847
SapurV1A.0005s0400
Salix purpurea
SapurV1A.0005s0400
N
0.847
SapurV1A.0019s0320
Salix purpurea
SapurV1A.0019s0320
N
0.847
SapurV1A.0476s0200
Salix purpurea
SapurV1A.0476s0200
N
0.847
Thhalv10026786m.g
Eutrema salsugineum
Thhalv10026786m.g
N
0.847
PK01802.1
Cannabis sativa
PK01802.1
N
0.847
chr1.CM0088.610.nd
Lotus japonicus
chr1.CM0088.610.nd
N
0.847
BGIOSGA011251
Oryza indica
BGIOSGA011251
N
0.845
LPERR11G16970
Leersia perrieri
LPERR11G16970
N
0.845
OB03G17860
Oryza brachyantha
OB03G17860
N
0.845
OBART03G07520
Oryza barthii
OBART03G07520
N
0.845
OGLUM03G07680
Oryza glumaepatula
OGLUM03G07680
N
0.845
OLONG_008046
Oryza longistaminata
OLONG_008046
N
0.845
OMERI03G07360
Oryza meridionalis
OMERI03G07360
N
0.845
ONIVA03G07980
Oryza nivara
ONIVA03G07980
N
0.845
OPUNC03G07300
Oryza punctata
OPUNC03G07300
N
0.845
ORGLA03G0073500
Oryza glaberrima
ORGLA03G0073500
N
0.845
ORUFI03G07580
Oryza rufipogon
ORUFI03G07580
N
0.845
OS03G0205300
Oryza sativa
OS03G0205300
N
0.845
PGSC0003DMG400039299
Solanum tuberosum
PGSC0003DMG400039299
N
0.845
Sb05g025230
Sorghum bicolor
Sb05g025230
N
0.845
Eucgr.F02259
Eucalyptus grandis
Eucgr.F02259
N
0.845
Eucgr.G01234
Eucalyptus grandis
Eucgr.G01234
N
0.845
GSMUA_Achr2G17130_001
Musa acuminata
GSMUA_Achr2G17130_001
N
0.844
Traes_5AL_ED57961C7
Triticum aestivum
Traes_5AL_ED57961C7
N
0.838
Traes_5DL_3BA7EE3F0
Triticum aestivum
Traes_5DL_3BA7EE3F0
N
0.838
gene25554-v1.0-hybrid
Fragaria vesca
gene25554-v1.0-hybrid
N
0.838