CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G135700
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.011G135700
T050098_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G135700.1
bHLH
45
89
SISTKDRKDKVGERIVTLQQLVSPYGKTDTASVLLQAMEYIQFLH
Gorai.011G135700.2
bHLH
44
88
SISTKDRKDKVGERIVTLQQLVSPYGKTDTASVLLQAMEYIQFLH
Gorai.011G135700.3
bHLH
44
88
SISTKDRKDKVGERIVTLQQLVSPYGKTDTASVLLQAMEYIQFLH
Gorai.011G135700.4
bHLH
44
88
SISTKDRKDKVGERIVTLQQLVSPYGKTDTASVLLQAMEYIQFLH
Gorai.011G135700.5
bHLH
44
88
SISTKDRKDKVGERIVTLQQLVSPYGKTDTASVLLQAMEYIQFLH
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla011068
Citrullus lanatus
Cla011068
N
0.892
Cucsa.095280
Cucumis sativus
Cucsa.095280
N
0.892
Bo4g049510
Brassica oleracea
Bo4g049510
N
0.869
Bra005644
Brassica rapa
Bra005644
N
0.869
Thhalv10017421m.g
Eutrema salsugineum
Thhalv10017421m.g
N
0.869
BHLH154
Arabidopsis thaliana
AT2G31730
N
0.868
POPTR_0013s13050
Populus trichocarpa
POPTR_0013s13050
N
0.868
POPTR_0019s12530
Populus trichocarpa
POPTR_0019s12530
N
0.868
PRUPE_ppa012528mg
Prunus persica
PRUPE_ppa012528mg
N
0.868
TCM_019871
Theobroma cacao
TCM_019871
N
0.868
Pm007388
Prunus mume
Pm007388
N
0.868
28405.m000015
Ricinus communis
28405.m000015
N
0.868
cassava36740.valid.m1
Manihot esculenta
cassava36740.valid.m1
N
0.868
cassava37772.valid.m1
Manihot esculenta
cassava37772.valid.m1
N
0.868
cassava37773.valid.m1
Manihot esculenta
cassava37773.valid.m1
N
0.868
SapurV1A.0388s0180
Salix purpurea
SapurV1A.0388s0180
N
0.868
Bo3g026410
Brassica oleracea
Bo3g026410
N
0.857
cassava21180.m1
Manihot esculenta
cassava21180.m1
N
0.856
VIT_05s0094g00480
Vitis vinifera
VIT_05s0094g00480
N
0.845