cassava21180.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava21180.m1 T047987_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21180.m1 bHLH 282 321

Links

Other bHLH family TFs
Other Manihot esculenta TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N 0.903
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N 0.903
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N 0.903
TCM_019871 Theobroma cacao TCM_019871 N 0.903
Pm007388 Prunus mume Pm007388 N 0.903
28405.m000015 Ricinus communis 28405.m000015 N 0.903
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N 0.903
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N 0.903
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N 0.903
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N 0.903
BGIOSGA000686 Oryza indica BGIOSGA000686 N 0.894
BGIOSGA017200 Oryza indica BGIOSGA017200 N 0.894
BGIOSGA020126 Oryza indica BGIOSGA020126 N 0.894
BGIOSGA020128 Oryza indica BGIOSGA020128 N 0.894
F775_12027 Aegilops tauschii F775_12027 N 0.894
F775_20405 Aegilops tauschii F775_20405 N 0.894
GLYMA13G32320 Glycine max GLYMA13G32320 N 0.894
GLYMA15G07010 Glycine max GLYMA15G07010 N 0.894
GRMZM2G004732 Zea mays GRMZM2G004732 N 0.894
GRMZM2G155217 Zea mays GRMZM2G155217 N 0.894
GRMZM2G313058 Zea mays GRMZM2G313058 N 0.894
GRMZM2G440529 Zea mays GRMZM2G440529 N 0.894
GSMUA_Achr10G04860_001 Musa acuminata GSMUA_Achr10G04860_001 N 0.894
GSMUA_Achr11G18680_001 Musa acuminata GSMUA_Achr11G18680_001 N 0.894
GSMUA_Achr4G33630_001 Musa acuminata GSMUA_Achr4G33630_001 N 0.894
GSMUA_Achr5G26430_001 Musa acuminata GSMUA_Achr5G26430_001 N 0.894
GSMUA_Achr9G12100_001 Musa acuminata GSMUA_Achr9G12100_001 N 0.894
GSMUA_Achr9G24670_001 Musa acuminata GSMUA_Achr9G24670_001 N 0.894
LPERR01G28830 Leersia perrieri LPERR01G28830 N 0.894
MLOC_37666 Hordeum vulgare MLOC_37666 N 0.894
MLOC_72940 Hordeum vulgare MLOC_72940 N 0.894
MTR_2g011070 Medicago truncatula MTR_2g011070 N 0.894
OB04G33270 Oryza brachyantha OB04G33270 N 0.894
OB05G29420 Oryza brachyantha OB05G29420 N 0.894
OB08G14900 Oryza brachyantha OB08G14900 N 0.894
OBART01G33360 Oryza barthii OBART01G33360 N 0.894
OBART04G24870 Oryza barthii OBART04G24870 N 0.894
OBART05G21860 Oryza barthii OBART05G21860 N 0.894
OGLUM01G37590 Oryza glumaepatula OGLUM01G37590 N 0.894
OGLUM04G26290 Oryza glumaepatula OGLUM04G26290 N 0.894
OGLUM05G23050 Oryza glumaepatula OGLUM05G23050 N 0.894
OLONG_006510 Oryza longistaminata OLONG_006510 N 0.894
OLONG_026655 Oryza longistaminata OLONG_026655 N 0.894
OMERI01G30260 Oryza meridionalis OMERI01G30260 N 0.894
OMERI04G21930 Oryza meridionalis OMERI04G21930 N 0.894
OMERI12G12400 Oryza meridionalis OMERI12G12400 N 0.894
ONIVA01G38120 Oryza nivara ONIVA01G38120 N 0.894
ONIVA03G13290 Oryza nivara ONIVA03G13290 N 0.894
ONIVA05G22530 Oryza nivara ONIVA05G22530 N 0.894
OPUNC01G32440 Oryza punctata OPUNC01G32440 N 0.894
OPUNC04G23980 Oryza punctata OPUNC04G23980 N 0.894
ORGLA04G0213700 Oryza glaberrima ORGLA04G0213700 N 0.894
ORGLA05G0190400 Oryza glaberrima ORGLA05G0190400 N 0.894
ORUFI01G36520 Oryza rufipogon ORUFI01G36520 N 0.894
ORUFI05G23130 Oryza rufipogon ORUFI05G23130 N 0.894
ORUFI06G19010 Oryza rufipogon ORUFI06G19010 N 0.894
OS04G0631600 Oryza sativa OS04G0631600 N 0.894
PGSC0003DMG400013875 Solanum tuberosum PGSC0003DMG400013875 N 0.894
POPTR_0004s02870 Populus trichocarpa POPTR_0004s02870 N 0.894
POPTR_0005s12150 Populus trichocarpa POPTR_0005s12150 N 0.894
POPTR_0007s13360 Populus trichocarpa POPTR_0007s13360 N 0.894
POPTR_0011s03560 Populus trichocarpa POPTR_0011s03560 N 0.894
PRUPE_ppa005924mg Prunus persica PRUPE_ppa005924mg N 0.894
Sb03g036670 Sorghum bicolor Sb03g036670 N 0.894
Sb07g004980 Sorghum bicolor Sb07g004980 N 0.894
Sb09g024720 Sorghum bicolor Sb09g024720 N 0.894
Si001796m.g Setaria italica Si001796m.g N 0.894
Si010139m.g Setaria italica Si010139m.g N 0.894
Si013853m.g Setaria italica Si013853m.g N 0.894
Si022548m.g Setaria italica Si022548m.g N 0.894
Solyc02g079760.2 Solanum lycopersicum Solyc02g079760.2 N 0.894
Solyc03g031450.2 Solanum lycopersicum Solyc03g031450.2 N 0.894
TCM_030051 Theobroma cacao TCM_030051 N 0.894
Traes_2AL_70AE1B8B8 Triticum aestivum Traes_2AL_70AE1B8B8 N 0.894
Traes_2BL_A014BCC51 Triticum aestivum Traes_2BL_A014BCC51 N 0.894
Traes_2BL_E82F7902D Triticum aestivum Traes_2BL_E82F7902D N 0.894
Traes_2DL_DCD7B13A8 Triticum aestivum Traes_2DL_DCD7B13A8 N 0.894
TRIUR3_00968 Triticum urartu TRIUR3_00968 N 0.894
VIT_00s0274g00070 Vitis vinifera VIT_00s0274g00070 N 0.894
VIT_04s0023g02410 Vitis vinifera VIT_04s0023g02410 N 0.894
Ca_00214 Cicer arietinum Ca_00214 N 0.894
Pm009855 Prunus mume Pm009855 N 0.894
29842.m003704 Ricinus communis 29842.m003704 N 0.894
cassava13240.valid.m1 Manihot esculenta cassava13240.valid.m1 N 0.894
cassava19346.valid.m1 Manihot esculenta cassava19346.valid.m1 N 0.894
mgf008488m Mimulus guttatus mgf008488m N 0.894
mgf016565m Mimulus guttatus mgf016565m N 0.894
Aquca_028_00271 Aquilegia coerulea Aquca_028_00271 N 0.894
Ciclev10015039m.g Citrus clementina Ciclev10015039m.g N 0.894
Eucgr.E03614 Eucalyptus grandis Eucgr.E03614 N 0.894
evm.TU.supercontig_27.162 Carica papaya evm.TU.supercontig_27.162 N 0.894
gene30665-v1.0-hybrid Fragaria vesca gene30665-v1.0-hybrid N 0.894
Gorai.006G085000 Gossypium raimondii Gorai.006G085000 N 0.894
Gorai.009G175300 Gossypium raimondii Gorai.009G175300 N 0.894
Gorai.010G147100 Gossypium raimondii Gorai.010G147100 N 0.894
Gorai.011G020100 Gossypium raimondii Gorai.011G020100 N 0.894
Lus10007613.g Linum usitatissimum Lus10007613.g N 0.894
Lus10018400.g Linum usitatissimum Lus10018400.g N 0.894
Lus10025987.g Linum usitatissimum Lus10025987.g N 0.894
MDP0000301999 Malus domestica MDP0000301999 N 0.894
orange1.1g011373m.g Citrus sinensis orange1.1g011373m.g N 0.894
Pavir.Ea03112 Panicum virgatum Pavir.Ea03112 N 0.894
Pavir.Eb03429 Panicum virgatum Pavir.Eb03429 N 0.894
Pavir.Ga00384 Panicum virgatum Pavir.Ga00384 N 0.894
Pavir.J10443 Panicum virgatum Pavir.J10443 N 0.894
Pavir.J13928 Panicum virgatum Pavir.J13928 N 0.894
Pavir.J25904 Panicum virgatum Pavir.J25904 N 0.894
SapurV1A.0028s0510 Salix purpurea SapurV1A.0028s0510 N 0.894
SapurV1A.0441s0120 Salix purpurea SapurV1A.0441s0120 N 0.894
SapurV1A.1304s0050 Salix purpurea SapurV1A.1304s0050 N 0.894
PK14284.1 Cannabis sativa PK14284.1 N 0.894
LjSGA_014369.1 Lotus japonicus LjSGA_014369.1 N 0.894
PDK_20s1457351g001 Phoenix dactylifera PDK_20s1457351g001 N 0.894
BHLH123 Arabidopsis thaliana AT3G20640 N 0.893
Bo01052s010 Brassica oleracea Bo01052s010 N 0.893
Bo3g076150 Brassica oleracea Bo3g076150 N 0.893
Bra001798 Brassica rapa Bra001798 N 0.893
GLYMA06G40760 Glycine max GLYMA06G40760 N 0.893
GLYMA12G17630 Glycine max GLYMA12G17630 N 0.893
GLYMA12G34490 Glycine max GLYMA12G34490 N 0.893
GLYMA13G36010 Glycine max GLYMA13G36010 N 0.893
MTR_2g081820 Medicago truncatula MTR_2g081820 N 0.893
MTR_8g466800 Medicago truncatula MTR_8g466800 N 0.893
PGSC0003DMG400005064 Solanum tuberosum PGSC0003DMG400005064 N 0.893
PGSC0003DMG400019236 Solanum tuberosum PGSC0003DMG400019236 N 0.893
PGSC0003DMG400025020 Solanum tuberosum PGSC0003DMG400025020 N 0.893
POPTR_0011s13320 Populus trichocarpa POPTR_0011s13320 N 0.893
PRUPE_ppa023041mg Prunus persica PRUPE_ppa023041mg N 0.893
Solyc07g063830.2 Solanum lycopersicum Solyc07g063830.2 N 0.893
Solyc10g006640.2 Solanum lycopersicum Solyc10g006640.2 N 0.893
TCM_031172 Theobroma cacao TCM_031172 N 0.893
VIT_19s0014g04670 Vitis vinifera VIT_19s0014g04670 N 0.893
Ca_06936 Cicer arietinum Ca_06936 N 0.893
Ca_19891 Cicer arietinum Ca_19891 N 0.893
Cla003883 Citrullus lanatus Cla003883 N 0.893
Pm011692 Prunus mume Pm011692 N 0.893
27733.m000033 Ricinus communis 27733.m000033 N 0.893
cassava28105.m1 Manihot esculenta cassava28105.m1 N 0.893
cassava36956.valid.m1 Manihot esculenta cassava36956.valid.m1 N 0.893
Cucsa.059580 Cucumis sativus Cucsa.059580 N 0.893
mgf001258m Mimulus guttatus mgf001258m N 0.893
Bostr.19424s0583 Boechera stricta Bostr.19424s0583 N 0.893
Cagra.0316s0001 Capsella grandiflora Cagra.0316s0001 N 0.893
Carubv10013632m.g Capsella rubella Carubv10013632m.g N 0.893
Ciclev10008228m.g Citrus clementina Ciclev10008228m.g N 0.893
Eucgr.F03384 Eucalyptus grandis Eucgr.F03384 N 0.893
evm.TU.supercontig_12.1 Carica papaya evm.TU.supercontig_12.1 N 0.893
gene03259-v1.0-hybrid Fragaria vesca gene03259-v1.0-hybrid N 0.893
Gorai.002G079200 Gossypium raimondii Gorai.002G079200 N 0.893
Gorai.009G429100 Gossypium raimondii Gorai.009G429100 N 0.893
Lus10038550.g Linum usitatissimum Lus10038550.g N 0.893
MDP0000295440 Malus domestica MDP0000295440 N 0.893
MDP0000296508 Malus domestica MDP0000296508 N 0.893
SapurV1A.0694s0030 Salix purpurea SapurV1A.0694s0030 N 0.893
Thhalv10020666m.g Eutrema salsugineum Thhalv10020666m.g N 0.893
PK22680.1 Cannabis sativa PK22680.1 N 0.893
Cucsa.125970 Cucumis sativus Cucsa.125970 N 0.891
GLYMA16G24661 Glycine max GLYMA16G24661 N 0.881
Bra035761 Brassica rapa Bra035761 N 0.880
Cla011068 Citrullus lanatus Cla011068 N 0.879
cassava33658.m1 Manihot esculenta cassava33658.m1 N 0.879
Cucsa.095280 Cucumis sativus Cucsa.095280 N 0.879
chr5.CM0200.1030.nc Lotus japonicus chr5.CM0200.1030.nc N 0.879
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N 0.878
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N 0.878
BHLH110 Arabidopsis thaliana AT1G27660 N 0.870
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N 0.870
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N 0.870
MLOC_57076 Hordeum vulgare MLOC_57076 N 0.870
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.870
OLONG_021979 Oryza longistaminata OLONG_021979 N 0.870
OPUNC01G00360 Oryza punctata OPUNC01G00360 N 0.870
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.870
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N 0.870
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.870
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.870
Sb03g008830 Sorghum bicolor Sb03g008830 N 0.870
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N 0.870
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.870
TCM_034098 Theobroma cacao TCM_034098 N 0.870
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.870
Ca_04928 Cicer arietinum Ca_04928 N 0.870
Cla021101 Citrullus lanatus Cla021101 N 0.870
Pm005865 Prunus mume Pm005865 N 0.870
30170.m014085 Ricinus communis 30170.m014085 N 0.870
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.870
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.870
Cucsa.359290 Cucumis sativus Cucsa.359290 N 0.870
mgf013138m Mimulus guttatus mgf013138m N 0.870
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.870
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N 0.870
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N 0.870
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N 0.870
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.870
MDP0000168695 Malus domestica MDP0000168695 N 0.870
MDP0000262020 Malus domestica MDP0000262020 N 0.870
MDP0000687814 Malus domestica MDP0000687814 N 0.870
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N 0.870
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N 0.870
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.870
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.870
SapurV1A.0658s0070 Salix purpurea SapurV1A.0658s0070 N 0.869
SapurV1A.2213s0020 Salix purpurea SapurV1A.2213s0020 N 0.869
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N 0.868
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N 0.859
AT4G05170 Arabidopsis thaliana AT4G05170 N 0.859
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N 0.859
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N 0.859
Carubv10003683m.g Capsella rubella Carubv10003683m.g N 0.859
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N 0.859
BHLH112 Arabidopsis thaliana AT1G61660 N 0.856
Bo1g098400 Brassica oleracea Bo1g098400 N 0.856
Bo9g041010 Brassica oleracea Bo9g041010 N 0.856
Bra027080 Brassica rapa Bra027080 N 0.856
Bra031413 Brassica rapa Bra031413 N 0.856
fgenesh2_kg.2__291__AT1G61660.1 Arabidopsis lyrata fgenesh2_kg.2__291__AT1G61660.1 N 0.856
Bostr.10040s0018 Boechera stricta Bostr.10040s0018 N 0.856
Cagra.2507s0001 Capsella grandiflora Cagra.2507s0001 N 0.856
Carubv10020420m.g Capsella rubella Carubv10020420m.g N 0.856
Gorai.011G135700 Gossypium raimondii Gorai.011G135700 N 0.856
Thhalv10023487m.g Eutrema salsugineum Thhalv10023487m.g N 0.856
BHLH154 Arabidopsis thaliana AT2G31730 N 0.855
Bo4g049510 Brassica oleracea Bo4g049510 N 0.854
Bra005644 Brassica rapa Bra005644 N 0.854
Thhalv10017421m.g Eutrema salsugineum Thhalv10017421m.g N 0.854
BHLH103 Arabidopsis thaliana AT4G21340 N 0.849
Bo1g024090 Brassica oleracea Bo1g024090 N 0.849
Bra013520 Brassica rapa Bra013520 N 0.849
Bostr.10689s0083 Boechera stricta Bostr.10689s0083 N 0.849
Bo9g076250 Brassica oleracea Bo9g076250 N 0.847
Bra029562 Brassica rapa Bra029562 N 0.847
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N 0.847
GLYMA02G15520 Glycine max GLYMA02G15520 N 0.844
MTR_4g087300 Medicago truncatula MTR_4g087300 N 0.844
Bo3g026410 Brassica oleracea Bo3g026410 N 0.842
Bo1g108770 Brassica oleracea Bo1g108770 N 0.840
Bo1g108780 Brassica oleracea Bo1g108780 N 0.840
Bra023939 Brassica rapa Bra023939 N 0.840