Cucsa.125970 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.125970 T048166_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.125970.1 bHLH 245 285

Links

Other bHLH family TFs
Other Cucumis sativus TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si001796m.g Setaria italica Si001796m.g N 0.911
Si010139m.g Setaria italica Si010139m.g N 0.911
Si013853m.g Setaria italica Si013853m.g N 0.911
Sb09g024720 Sorghum bicolor Sb09g024720 N 0.911
Sb07g004980 Sorghum bicolor Sb07g004980 N 0.911
PRUPE_ppa005924mg Prunus persica PRUPE_ppa005924mg N 0.911
Sb03g036670 Sorghum bicolor Sb03g036670 N 0.911
Si022548m.g Setaria italica Si022548m.g N 0.911
Solyc02g079760.2 Solanum lycopersicum Solyc02g079760.2 N 0.911
Traes_2DL_DCD7B13A8 Triticum aestivum Traes_2DL_DCD7B13A8 N 0.911
TRIUR3_00968 Triticum urartu TRIUR3_00968 N 0.911
VIT_00s0274g00070 Vitis vinifera VIT_00s0274g00070 N 0.911
Traes_2BL_E82F7902D Triticum aestivum Traes_2BL_E82F7902D N 0.911
Traes_2BL_A014BCC51 Triticum aestivum Traes_2BL_A014BCC51 N 0.911
Solyc03g031450.2 Solanum lycopersicum Solyc03g031450.2 N 0.911
Traes_2AL_70AE1B8B8 Triticum aestivum Traes_2AL_70AE1B8B8 N 0.911
POPTR_0011s03560 Populus trichocarpa POPTR_0011s03560 N 0.911
POPTR_0007s13360 Populus trichocarpa POPTR_0007s13360 N 0.911
OPUNC01G32440 Oryza punctata OPUNC01G32440 N 0.911
OPUNC04G23980 Oryza punctata OPUNC04G23980 N 0.911
ORGLA04G0213700 Oryza glaberrima ORGLA04G0213700 N 0.911
ONIVA05G22530 Oryza nivara ONIVA05G22530 N 0.911
ONIVA03G13290 Oryza nivara ONIVA03G13290 N 0.911
OMERI12G12400 Oryza meridionalis OMERI12G12400 N 0.911
ONIVA01G38120 Oryza nivara ONIVA01G38120 N 0.911
ORGLA05G0190400 Oryza glaberrima ORGLA05G0190400 N 0.911
ORUFI01G36520 Oryza rufipogon ORUFI01G36520 N 0.911
POPTR_0004s02870 Populus trichocarpa POPTR_0004s02870 N 0.911
POPTR_0005s12150 Populus trichocarpa POPTR_0005s12150 N 0.911
PGSC0003DMG400013875 Solanum tuberosum PGSC0003DMG400013875 N 0.911
OS04G0631600 Oryza sativa OS04G0631600 N 0.911
ORUFI05G23130 Oryza rufipogon ORUFI05G23130 N 0.911
ORUFI06G19010 Oryza rufipogon ORUFI06G19010 N 0.911
VIT_04s0023g02410 Vitis vinifera VIT_04s0023g02410 N 0.911
Ca_00214 Cicer arietinum Ca_00214 N 0.911
Pavir.Eb03429 Panicum virgatum Pavir.Eb03429 N 0.911
Pavir.Ga00384 Panicum virgatum Pavir.Ga00384 N 0.911
Pavir.J10443 Panicum virgatum Pavir.J10443 N 0.911
Pavir.Ea03112 Panicum virgatum Pavir.Ea03112 N 0.911
orange1.1g011373m.g Citrus sinensis orange1.1g011373m.g N 0.911
Lus10025987.g Linum usitatissimum Lus10025987.g N 0.911
MDP0000301999 Malus domestica MDP0000301999 N 0.911
Pavir.J13928 Panicum virgatum Pavir.J13928 N 0.911
Pavir.J25904 Panicum virgatum Pavir.J25904 N 0.911
LjSGA_014369.1 Lotus japonicus LjSGA_014369.1 N 0.911
PDK_20s1457351g001 Phoenix dactylifera PDK_20s1457351g001 N 0.911
PK14284.1 Cannabis sativa PK14284.1 N 0.911
SapurV1A.1304s0050 Salix purpurea SapurV1A.1304s0050 N 0.911
SapurV1A.0028s0510 Salix purpurea SapurV1A.0028s0510 N 0.911
SapurV1A.0441s0120 Salix purpurea SapurV1A.0441s0120 N 0.911
Lus10018400.g Linum usitatissimum Lus10018400.g N 0.911
Lus10007613.g Linum usitatissimum Lus10007613.g N 0.911
mgf008488m Mimulus guttatus mgf008488m N 0.911
mgf016565m Mimulus guttatus mgf016565m N 0.911
Aquca_028_00271 Aquilegia coerulea Aquca_028_00271 N 0.911
cassava19346.valid.m1 Manihot esculenta cassava19346.valid.m1 N 0.911
cassava13240.valid.m1 Manihot esculenta cassava13240.valid.m1 N 0.911
Pm009855 Prunus mume Pm009855 N 0.911
29842.m003704 Ricinus communis 29842.m003704 N 0.911
Ciclev10015039m.g Citrus clementina Ciclev10015039m.g N 0.911
Eucgr.E03614 Eucalyptus grandis Eucgr.E03614 N 0.911
Gorai.010G147100 Gossypium raimondii Gorai.010G147100 N 0.911
Gorai.011G020100 Gossypium raimondii Gorai.011G020100 N 0.911
Gorai.009G175300 Gossypium raimondii Gorai.009G175300 N 0.911
Gorai.006G085000 Gossypium raimondii Gorai.006G085000 N 0.911
evm.TU.supercontig_27.162 Carica papaya evm.TU.supercontig_27.162 N 0.911
gene30665-v1.0-hybrid Fragaria vesca gene30665-v1.0-hybrid N 0.911
OMERI04G21930 Oryza meridionalis OMERI04G21930 N 0.911
TCM_030051 Theobroma cacao TCM_030051 N 0.911
GSMUA_Achr9G24670_001 Musa acuminata GSMUA_Achr9G24670_001 N 0.911
GSMUA_Achr9G12100_001 Musa acuminata GSMUA_Achr9G12100_001 N 0.911
BGIOSGA017200 Oryza indica BGIOSGA017200 N 0.911
GSMUA_Achr5G26430_001 Musa acuminata GSMUA_Achr5G26430_001 N 0.911
LPERR01G28830 Leersia perrieri LPERR01G28830 N 0.911
MLOC_37666 Hordeum vulgare MLOC_37666 N 0.911
MLOC_72940 Hordeum vulgare MLOC_72940 N 0.911
BGIOSGA020126 Oryza indica BGIOSGA020126 N 0.911
F775_20405 Aegilops tauschii F775_20405 N 0.911
GSMUA_Achr4G33630_001 Musa acuminata GSMUA_Achr4G33630_001 N 0.911
GSMUA_Achr11G18680_001 Musa acuminata GSMUA_Achr11G18680_001 N 0.911
GRMZM2G155217 Zea mays GRMZM2G155217 N 0.911
GRMZM2G004732 Zea mays GRMZM2G004732 N 0.911
GLYMA15G07010 Glycine max GLYMA15G07010 N 0.911
GLYMA13G32320 Glycine max GLYMA13G32320 N 0.911
GRMZM2G313058 Zea mays GRMZM2G313058 N 0.911
GRMZM2G440529 Zea mays GRMZM2G440529 N 0.911
BGIOSGA000686 Oryza indica BGIOSGA000686 N 0.911
OMERI01G30260 Oryza meridionalis OMERI01G30260 N 0.911
GSMUA_Achr10G04860_001 Musa acuminata GSMUA_Achr10G04860_001 N 0.911
MTR_2g011070 Medicago truncatula MTR_2g011070 N 0.911
BGIOSGA020128 Oryza indica BGIOSGA020128 N 0.911
OBART05G21860 Oryza barthii OBART05G21860 N 0.911
OBART04G24870 Oryza barthii OBART04G24870 N 0.911
OB08G14900 Oryza brachyantha OB08G14900 N 0.911
OB05G29420 Oryza brachyantha OB05G29420 N 0.911
OGLUM01G37590 Oryza glumaepatula OGLUM01G37590 N 0.911
OGLUM04G26290 Oryza glumaepatula OGLUM04G26290 N 0.911
OLONG_026655 Oryza longistaminata OLONG_026655 N 0.911
OLONG_006510 Oryza longistaminata OLONG_006510 N 0.911
OGLUM05G23050 Oryza glumaepatula OGLUM05G23050 N 0.911
OB04G33270 Oryza brachyantha OB04G33270 N 0.911
OBART01G33360 Oryza barthii OBART01G33360 N 0.911
F775_12027 Aegilops tauschii F775_12027 N 0.911
MDP0000295440 Malus domestica MDP0000295440 N 0.910
Gorai.009G429100 Gossypium raimondii Gorai.009G429100 N 0.910
MDP0000296508 Malus domestica MDP0000296508 N 0.910
Bo01052s010 Brassica oleracea Bo01052s010 N 0.910
Cagra.0316s0001 Capsella grandiflora Cagra.0316s0001 N 0.910
GLYMA12G34490 Glycine max GLYMA12G34490 N 0.910
27733.m000033 Ricinus communis 27733.m000033 N 0.910
SapurV1A.0694s0030 Salix purpurea SapurV1A.0694s0030 N 0.910
Cla003883 Citrullus lanatus Cla003883 N 0.910
Lus10038550.g Linum usitatissimum Lus10038550.g N 0.910
Pm011692 Prunus mume Pm011692 N 0.910
GLYMA12G17630 Glycine max GLYMA12G17630 N 0.910
Gorai.002G079200 Gossypium raimondii Gorai.002G079200 N 0.910
cassava28105.m1 Manihot esculenta cassava28105.m1 N 0.910
gene03259-v1.0-hybrid Fragaria vesca gene03259-v1.0-hybrid N 0.910
Ca_19891 Cicer arietinum Ca_19891 N 0.910
Bra001798 Brassica rapa Bra001798 N 0.910
Bo3g076150 Brassica oleracea Bo3g076150 N 0.910
evm.TU.supercontig_12.1 Carica papaya evm.TU.supercontig_12.1 N 0.910
mgf001258m Mimulus guttatus mgf001258m N 0.910
Carubv10013632m.g Capsella rubella Carubv10013632m.g N 0.910
cassava36956.valid.m1 Manihot esculenta cassava36956.valid.m1 N 0.910
Eucgr.F03384 Eucalyptus grandis Eucgr.F03384 N 0.910
Ciclev10008228m.g Citrus clementina Ciclev10008228m.g N 0.910
Bostr.19424s0583 Boechera stricta Bostr.19424s0583 N 0.910
Cucsa.059580 Cucumis sativus Cucsa.059580 N 0.910
GLYMA06G40760 Glycine max GLYMA06G40760 N 0.910
GLYMA13G36010 Glycine max GLYMA13G36010 N 0.910
Ca_06936 Cicer arietinum Ca_06936 N 0.910
BHLH123 Arabidopsis thaliana AT3G20640 N 0.910
TCM_031172 Theobroma cacao TCM_031172 N 0.910
MTR_8g466800 Medicago truncatula MTR_8g466800 N 0.910
PK22680.1 Cannabis sativa PK22680.1 N 0.910
POPTR_0011s13320 Populus trichocarpa POPTR_0011s13320 N 0.910
Solyc07g063830.2 Solanum lycopersicum Solyc07g063830.2 N 0.910
Solyc10g006640.2 Solanum lycopersicum Solyc10g006640.2 N 0.910
MTR_2g081820 Medicago truncatula MTR_2g081820 N 0.910
PGSC0003DMG400025020 Solanum tuberosum PGSC0003DMG400025020 N 0.910
PGSC0003DMG400005064 Solanum tuberosum PGSC0003DMG400005064 N 0.910
PRUPE_ppa023041mg Prunus persica PRUPE_ppa023041mg N 0.910
Thhalv10020666m.g Eutrema salsugineum Thhalv10020666m.g N 0.910
VIT_19s0014g04670 Vitis vinifera VIT_19s0014g04670 N 0.910
PGSC0003DMG400019236 Solanum tuberosum PGSC0003DMG400019236 N 0.910
GLYMA16G24661 Glycine max GLYMA16G24661 N 0.899
Bra035761 Brassica rapa Bra035761 N 0.898
cassava21180.m1 Manihot esculenta cassava21180.m1 N 0.891
MDP0000262020 Malus domestica MDP0000262020 N 0.887
MDP0000168695 Malus domestica MDP0000168695 N 0.887
MDP0000687814 Malus domestica MDP0000687814 N 0.887
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.887
BHLH110 Arabidopsis thaliana AT1G27660 N 0.887
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N 0.887
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N 0.887
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N 0.887
OPUNC01G00360 Oryza punctata OPUNC01G00360 N 0.887
OLONG_021979 Oryza longistaminata OLONG_021979 N 0.887
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.887
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N 0.887
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N 0.887
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.887
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.887
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.887
mgf013138m Mimulus guttatus mgf013138m N 0.887
30170.m014085 Ricinus communis 30170.m014085 N 0.887
TCM_034098 Theobroma cacao TCM_034098 N 0.887
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.887
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.887
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.887
Ca_04928 Cicer arietinum Ca_04928 N 0.887
Cla021101 Citrullus lanatus Cla021101 N 0.887
Pm005865 Prunus mume Pm005865 N 0.887
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.887
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.887
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N 0.887
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N 0.887
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N 0.887
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.887
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N 0.887
Cucsa.359290 Cucumis sativus Cucsa.359290 N 0.887
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.887
MLOC_57076 Hordeum vulgare MLOC_57076 N 0.887
Sb03g008830 Sorghum bicolor Sb03g008830 N 0.887
SapurV1A.2213s0020 Salix purpurea SapurV1A.2213s0020 N 0.886
SapurV1A.0658s0070 Salix purpurea SapurV1A.0658s0070 N 0.886
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N 0.885
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N 0.879
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N 0.879
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N 0.879
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N 0.879
28405.m000015 Ricinus communis 28405.m000015 N 0.879
TCM_019871 Theobroma cacao TCM_019871 N 0.879
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N 0.879
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N 0.879
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N 0.879
Pm007388 Prunus mume Pm007388 N 0.879
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N 0.876
Bo1g098400 Brassica oleracea Bo1g098400 N 0.876
Bostr.10040s0018 Boechera stricta Bostr.10040s0018 N 0.876
fgenesh2_kg.2__291__AT1G61660.1 Arabidopsis lyrata fgenesh2_kg.2__291__AT1G61660.1 N 0.876
Thhalv10023487m.g Eutrema salsugineum Thhalv10023487m.g N 0.876
AT4G05170 Arabidopsis thaliana AT4G05170 N 0.876
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N 0.876
Bo9g041010 Brassica oleracea Bo9g041010 N 0.876
Bra031413 Brassica rapa Bra031413 N 0.876
Bra027080 Brassica rapa Bra027080 N 0.876
BHLH112 Arabidopsis thaliana AT1G61660 N 0.876
Carubv10020420m.g Capsella rubella Carubv10020420m.g N 0.876
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N 0.876
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N 0.876
Cagra.2507s0001 Capsella grandiflora Cagra.2507s0001 N 0.876
Carubv10003683m.g Capsella rubella Carubv10003683m.g N 0.876
BHLH103 Arabidopsis thaliana AT4G21340 N 0.866
Bostr.10689s0083 Boechera stricta Bostr.10689s0083 N 0.866
Bo1g024090 Brassica oleracea Bo1g024090 N 0.866
Bra013520 Brassica rapa Bra013520 N 0.866
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N 0.864
Bra029562 Brassica rapa Bra029562 N 0.864
Bo9g076250 Brassica oleracea Bo9g076250 N 0.864
Bo1g108780 Brassica oleracea Bo1g108780 N 0.857
Bo1g108770 Brassica oleracea Bo1g108770 N 0.857
Bra023939 Brassica rapa Bra023939 N 0.857
cassava33658.m1 Manihot esculenta cassava33658.m1 N 0.856
Cla011068 Citrullus lanatus Cla011068 N 0.855
Cucsa.095280 Cucumis sativus Cucsa.095280 N 0.855
chr5.CM0200.1030.nc Lotus japonicus chr5.CM0200.1030.nc N 0.855
Cagra.1062s0002 Capsella grandiflora Cagra.1062s0002 N 0.854
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N 0.854
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N 0.854
Carubv10006994m.g Capsella rubella Carubv10006994m.g N 0.854