TCM_019871 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_019871 T045388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY04674 bHLH 44 88
EOY04675 bHLH 44 88
EOY04676 bHLH 28 72

Links

Other bHLH family TFs
Other Theobroma cacao TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N 0.914
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N 0.914
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N 0.914
Pm007388 Prunus mume Pm007388 N 0.914
28405.m000015 Ricinus communis 28405.m000015 N 0.914
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N 0.914
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N 0.914
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N 0.914
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N 0.914
cassava21180.m1 Manihot esculenta cassava21180.m1 N 0.903
Cla011068 Citrullus lanatus Cla011068 N 0.890
Cucsa.095280 Cucumis sativus Cucsa.095280 N 0.890
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N 0.889
BGIOSGA000686 Oryza indica BGIOSGA000686 N 0.883
BGIOSGA017200 Oryza indica BGIOSGA017200 N 0.883
BGIOSGA020126 Oryza indica BGIOSGA020126 N 0.883
BGIOSGA020128 Oryza indica BGIOSGA020128 N 0.883
F775_12027 Aegilops tauschii F775_12027 N 0.883
F775_20405 Aegilops tauschii F775_20405 N 0.883
GLYMA13G32320 Glycine max GLYMA13G32320 N 0.883
GLYMA15G07010 Glycine max GLYMA15G07010 N 0.883
GRMZM2G004732 Zea mays GRMZM2G004732 N 0.883
GRMZM2G155217 Zea mays GRMZM2G155217 N 0.883
GRMZM2G313058 Zea mays GRMZM2G313058 N 0.883
GRMZM2G440529 Zea mays GRMZM2G440529 N 0.883
GSMUA_Achr10G04860_001 Musa acuminata GSMUA_Achr10G04860_001 N 0.883
GSMUA_Achr11G18680_001 Musa acuminata GSMUA_Achr11G18680_001 N 0.883
GSMUA_Achr4G33630_001 Musa acuminata GSMUA_Achr4G33630_001 N 0.883
GSMUA_Achr5G26430_001 Musa acuminata GSMUA_Achr5G26430_001 N 0.883
GSMUA_Achr9G12100_001 Musa acuminata GSMUA_Achr9G12100_001 N 0.883
GSMUA_Achr9G24670_001 Musa acuminata GSMUA_Achr9G24670_001 N 0.883
LPERR01G28830 Leersia perrieri LPERR01G28830 N 0.883
MLOC_37666 Hordeum vulgare MLOC_37666 N 0.883
MLOC_72940 Hordeum vulgare MLOC_72940 N 0.883
MTR_2g011070 Medicago truncatula MTR_2g011070 N 0.883
OB04G33270 Oryza brachyantha OB04G33270 N 0.883
OB05G29420 Oryza brachyantha OB05G29420 N 0.883
OB08G14900 Oryza brachyantha OB08G14900 N 0.883
OBART01G33360 Oryza barthii OBART01G33360 N 0.883
OBART04G24870 Oryza barthii OBART04G24870 N 0.883
OBART05G21860 Oryza barthii OBART05G21860 N 0.883
OGLUM01G37590 Oryza glumaepatula OGLUM01G37590 N 0.883
OGLUM04G26290 Oryza glumaepatula OGLUM04G26290 N 0.883
OGLUM05G23050 Oryza glumaepatula OGLUM05G23050 N 0.883
OLONG_006510 Oryza longistaminata OLONG_006510 N 0.883
OLONG_026655 Oryza longistaminata OLONG_026655 N 0.883
OMERI01G30260 Oryza meridionalis OMERI01G30260 N 0.883
OMERI04G21930 Oryza meridionalis OMERI04G21930 N 0.883
OMERI12G12400 Oryza meridionalis OMERI12G12400 N 0.883
ONIVA01G38120 Oryza nivara ONIVA01G38120 N 0.883
ONIVA03G13290 Oryza nivara ONIVA03G13290 N 0.883
ONIVA05G22530 Oryza nivara ONIVA05G22530 N 0.883
OPUNC01G32440 Oryza punctata OPUNC01G32440 N 0.883
OPUNC04G23980 Oryza punctata OPUNC04G23980 N 0.883
ORGLA04G0213700 Oryza glaberrima ORGLA04G0213700 N 0.883
ORGLA05G0190400 Oryza glaberrima ORGLA05G0190400 N 0.883
ORUFI01G36520 Oryza rufipogon ORUFI01G36520 N 0.883
ORUFI05G23130 Oryza rufipogon ORUFI05G23130 N 0.883
ORUFI06G19010 Oryza rufipogon ORUFI06G19010 N 0.883
OS04G0631600 Oryza sativa OS04G0631600 N 0.883
PGSC0003DMG400013875 Solanum tuberosum PGSC0003DMG400013875 N 0.883
POPTR_0004s02870 Populus trichocarpa POPTR_0004s02870 N 0.883
POPTR_0005s12150 Populus trichocarpa POPTR_0005s12150 N 0.883
POPTR_0007s13360 Populus trichocarpa POPTR_0007s13360 N 0.883
POPTR_0011s03560 Populus trichocarpa POPTR_0011s03560 N 0.883
PRUPE_ppa005924mg Prunus persica PRUPE_ppa005924mg N 0.883
Sb03g036670 Sorghum bicolor Sb03g036670 N 0.883
Sb07g004980 Sorghum bicolor Sb07g004980 N 0.883
Sb09g024720 Sorghum bicolor Sb09g024720 N 0.883
Si001796m.g Setaria italica Si001796m.g N 0.883
Si010139m.g Setaria italica Si010139m.g N 0.883
Si013853m.g Setaria italica Si013853m.g N 0.883
Si022548m.g Setaria italica Si022548m.g N 0.883
Solyc02g079760.2 Solanum lycopersicum Solyc02g079760.2 N 0.883
Solyc03g031450.2 Solanum lycopersicum Solyc03g031450.2 N 0.883
TCM_030051 Theobroma cacao TCM_030051 N 0.883
Traes_2AL_70AE1B8B8 Triticum aestivum Traes_2AL_70AE1B8B8 N 0.883
Traes_2BL_A014BCC51 Triticum aestivum Traes_2BL_A014BCC51 N 0.883
Traes_2BL_E82F7902D Triticum aestivum Traes_2BL_E82F7902D N 0.883
Traes_2DL_DCD7B13A8 Triticum aestivum Traes_2DL_DCD7B13A8 N 0.883
TRIUR3_00968 Triticum urartu TRIUR3_00968 N 0.883
VIT_00s0274g00070 Vitis vinifera VIT_00s0274g00070 N 0.883
VIT_04s0023g02410 Vitis vinifera VIT_04s0023g02410 N 0.883
Ca_00214 Cicer arietinum Ca_00214 N 0.883
Pm009855 Prunus mume Pm009855 N 0.883
29842.m003704 Ricinus communis 29842.m003704 N 0.883
cassava13240.valid.m1 Manihot esculenta cassava13240.valid.m1 N 0.883
cassava19346.valid.m1 Manihot esculenta cassava19346.valid.m1 N 0.883
mgf008488m Mimulus guttatus mgf008488m N 0.883
mgf016565m Mimulus guttatus mgf016565m N 0.883
Aquca_028_00271 Aquilegia coerulea Aquca_028_00271 N 0.883
Ciclev10015039m.g Citrus clementina Ciclev10015039m.g N 0.883
Eucgr.E03614 Eucalyptus grandis Eucgr.E03614 N 0.883
evm.TU.supercontig_27.162 Carica papaya evm.TU.supercontig_27.162 N 0.883
gene30665-v1.0-hybrid Fragaria vesca gene30665-v1.0-hybrid N 0.883
Gorai.006G085000 Gossypium raimondii Gorai.006G085000 N 0.883
Gorai.009G175300 Gossypium raimondii Gorai.009G175300 N 0.883
Gorai.010G147100 Gossypium raimondii Gorai.010G147100 N 0.883
Gorai.011G020100 Gossypium raimondii Gorai.011G020100 N 0.883
Lus10007613.g Linum usitatissimum Lus10007613.g N 0.883
Lus10018400.g Linum usitatissimum Lus10018400.g N 0.883
Lus10025987.g Linum usitatissimum Lus10025987.g N 0.883
MDP0000301999 Malus domestica MDP0000301999 N 0.883
orange1.1g011373m.g Citrus sinensis orange1.1g011373m.g N 0.883
Pavir.Ea03112 Panicum virgatum Pavir.Ea03112 N 0.883
Pavir.Eb03429 Panicum virgatum Pavir.Eb03429 N 0.883
Pavir.Ga00384 Panicum virgatum Pavir.Ga00384 N 0.883
Pavir.J10443 Panicum virgatum Pavir.J10443 N 0.883
Pavir.J13928 Panicum virgatum Pavir.J13928 N 0.883
Pavir.J25904 Panicum virgatum Pavir.J25904 N 0.883
SapurV1A.0028s0510 Salix purpurea SapurV1A.0028s0510 N 0.883
SapurV1A.0441s0120 Salix purpurea SapurV1A.0441s0120 N 0.883
SapurV1A.1304s0050 Salix purpurea SapurV1A.1304s0050 N 0.883
PK14284.1 Cannabis sativa PK14284.1 N 0.883
LjSGA_014369.1 Lotus japonicus LjSGA_014369.1 N 0.883
PDK_20s1457351g001 Phoenix dactylifera PDK_20s1457351g001 N 0.883
BHLH123 Arabidopsis thaliana AT3G20640 N 0.882
Bo01052s010 Brassica oleracea Bo01052s010 N 0.882
Bo3g076150 Brassica oleracea Bo3g076150 N 0.882
Bra001798 Brassica rapa Bra001798 N 0.882
GLYMA06G40760 Glycine max GLYMA06G40760 N 0.882
GLYMA12G17630 Glycine max GLYMA12G17630 N 0.882
GLYMA12G34490 Glycine max GLYMA12G34490 N 0.882
GLYMA13G36010 Glycine max GLYMA13G36010 N 0.882
MTR_2g081820 Medicago truncatula MTR_2g081820 N 0.882
MTR_8g466800 Medicago truncatula MTR_8g466800 N 0.882
PGSC0003DMG400005064 Solanum tuberosum PGSC0003DMG400005064 N 0.882
PGSC0003DMG400019236 Solanum tuberosum PGSC0003DMG400019236 N 0.882
PGSC0003DMG400025020 Solanum tuberosum PGSC0003DMG400025020 N 0.882
POPTR_0011s13320 Populus trichocarpa POPTR_0011s13320 N 0.882
PRUPE_ppa023041mg Prunus persica PRUPE_ppa023041mg N 0.882
Solyc07g063830.2 Solanum lycopersicum Solyc07g063830.2 N 0.882
Solyc10g006640.2 Solanum lycopersicum Solyc10g006640.2 N 0.882
TCM_031172 Theobroma cacao TCM_031172 N 0.882
VIT_19s0014g04670 Vitis vinifera VIT_19s0014g04670 N 0.882
Ca_06936 Cicer arietinum Ca_06936 N 0.882
Ca_19891 Cicer arietinum Ca_19891 N 0.882
Cla003883 Citrullus lanatus Cla003883 N 0.882
Pm011692 Prunus mume Pm011692 N 0.882
27733.m000033 Ricinus communis 27733.m000033 N 0.882
cassava28105.m1 Manihot esculenta cassava28105.m1 N 0.882
cassava36956.valid.m1 Manihot esculenta cassava36956.valid.m1 N 0.882
Cucsa.059580 Cucumis sativus Cucsa.059580 N 0.882
mgf001258m Mimulus guttatus mgf001258m N 0.882
Bostr.19424s0583 Boechera stricta Bostr.19424s0583 N 0.882
Cagra.0316s0001 Capsella grandiflora Cagra.0316s0001 N 0.882
Carubv10013632m.g Capsella rubella Carubv10013632m.g N 0.882
Ciclev10008228m.g Citrus clementina Ciclev10008228m.g N 0.882
Eucgr.F03384 Eucalyptus grandis Eucgr.F03384 N 0.882
evm.TU.supercontig_12.1 Carica papaya evm.TU.supercontig_12.1 N 0.882
gene03259-v1.0-hybrid Fragaria vesca gene03259-v1.0-hybrid N 0.882
Gorai.002G079200 Gossypium raimondii Gorai.002G079200 N 0.882
Gorai.009G429100 Gossypium raimondii Gorai.009G429100 N 0.882
Lus10038550.g Linum usitatissimum Lus10038550.g N 0.882
MDP0000295440 Malus domestica MDP0000295440 N 0.882
MDP0000296508 Malus domestica MDP0000296508 N 0.882
SapurV1A.0694s0030 Salix purpurea SapurV1A.0694s0030 N 0.882
Thhalv10020666m.g Eutrema salsugineum Thhalv10020666m.g N 0.882
PK22680.1 Cannabis sativa PK22680.1 N 0.882
Cucsa.125970 Cucumis sativus Cucsa.125970 N 0.879
chr5.CM0200.1030.nc Lotus japonicus chr5.CM0200.1030.nc N 0.879
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N 0.878
GLYMA16G24661 Glycine max GLYMA16G24661 N 0.870
Bra035761 Brassica rapa Bra035761 N 0.869
cassava33658.m1 Manihot esculenta cassava33658.m1 N 0.868
Gorai.011G135700 Gossypium raimondii Gorai.011G135700 N 0.868
BHLH154 Arabidopsis thaliana AT2G31730 N 0.866
Bo4g049510 Brassica oleracea Bo4g049510 N 0.865
Bra005644 Brassica rapa Bra005644 N 0.865
Thhalv10017421m.g Eutrema salsugineum Thhalv10017421m.g N 0.865
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N 0.859
BHLH110 Arabidopsis thaliana AT1G27660 N 0.859
AT4G05170 Arabidopsis thaliana AT4G05170 N 0.859
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N 0.859
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N 0.859
MLOC_57076 Hordeum vulgare MLOC_57076 N 0.859
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.859
OLONG_021979 Oryza longistaminata OLONG_021979 N 0.859
OPUNC01G00360 Oryza punctata OPUNC01G00360 N 0.859
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.859
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N 0.859
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.859
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.859
Sb03g008830 Sorghum bicolor Sb03g008830 N 0.859
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N 0.859
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.859
TCM_034098 Theobroma cacao TCM_034098 N 0.859
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.859
Ca_04928 Cicer arietinum Ca_04928 N 0.859
Cla021101 Citrullus lanatus Cla021101 N 0.859
Pm005865 Prunus mume Pm005865 N 0.859
30170.m014085 Ricinus communis 30170.m014085 N 0.859
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.859
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.859
Cucsa.359290 Cucumis sativus Cucsa.359290 N 0.859
mgf013138m Mimulus guttatus mgf013138m N 0.859
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.859
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N 0.859
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N 0.859
Carubv10003683m.g Capsella rubella Carubv10003683m.g N 0.859
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N 0.859
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N 0.859
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N 0.859
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.859
MDP0000168695 Malus domestica MDP0000168695 N 0.859
MDP0000262020 Malus domestica MDP0000262020 N 0.859
MDP0000687814 Malus domestica MDP0000687814 N 0.859
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N 0.859
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N 0.859
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.859
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N 0.859
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.859
SapurV1A.0658s0070 Salix purpurea SapurV1A.0658s0070 N 0.857
SapurV1A.2213s0020 Salix purpurea SapurV1A.2213s0020 N 0.857
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N 0.856
GLYMA02G15520 Glycine max GLYMA02G15520 N 0.855
MTR_4g087300 Medicago truncatula MTR_4g087300 N 0.855
Bo3g026410 Brassica oleracea Bo3g026410 N 0.853
Bo9g076250 Brassica oleracea Bo9g076250 N 0.847
Bra029562 Brassica rapa Bra029562 N 0.847
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N 0.847
BHLH112 Arabidopsis thaliana AT1G61660 N 0.844
Bo1g098400 Brassica oleracea Bo1g098400 N 0.844
Bo9g041010 Brassica oleracea Bo9g041010 N 0.844
Bra027080 Brassica rapa Bra027080 N 0.844
Bra031413 Brassica rapa Bra031413 N 0.844
fgenesh2_kg.2__291__AT1G61660.1 Arabidopsis lyrata fgenesh2_kg.2__291__AT1G61660.1 N 0.844
Bostr.10040s0018 Boechera stricta Bostr.10040s0018 N 0.844
Cagra.2507s0001 Capsella grandiflora Cagra.2507s0001 N 0.844
Carubv10020420m.g Capsella rubella Carubv10020420m.g N 0.844
Thhalv10023487m.g Eutrema salsugineum Thhalv10023487m.g N 0.844