CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc07g063830.2
(
Solanum lycopersicum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Solyc07g063830.2
T045103_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc07g063830.2.1
bHLH
367
407
KVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLH
Links
Other
bHLH
family TFs
Other
Solanum lycopersicum
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH123
Arabidopsis thaliana
AT3G20640
N
0.914
Bo01052s010
Brassica oleracea
Bo01052s010
N
0.914
Bo3g076150
Brassica oleracea
Bo3g076150
N
0.914
Bra001798
Brassica rapa
Bra001798
N
0.914
GLYMA06G40760
Glycine max
GLYMA06G40760
N
0.914
GLYMA12G17630
Glycine max
GLYMA12G17630
N
0.914
GLYMA12G34490
Glycine max
GLYMA12G34490
N
0.914
GLYMA13G36010
Glycine max
GLYMA13G36010
N
0.914
MTR_2g081820
Medicago truncatula
MTR_2g081820
N
0.914
MTR_8g466800
Medicago truncatula
MTR_8g466800
N
0.914
PGSC0003DMG400005064
Solanum tuberosum
PGSC0003DMG400005064
N
0.914
PGSC0003DMG400019236
Solanum tuberosum
PGSC0003DMG400019236
N
0.914
PGSC0003DMG400025020
Solanum tuberosum
PGSC0003DMG400025020
N
0.914
POPTR_0011s13320
Populus trichocarpa
POPTR_0011s13320
N
0.914
PRUPE_ppa023041mg
Prunus persica
PRUPE_ppa023041mg
N
0.914
Solyc10g006640.2
Solanum lycopersicum
Solyc10g006640.2
N
0.914
TCM_031172
Theobroma cacao
TCM_031172
N
0.914
VIT_19s0014g04670
Vitis vinifera
VIT_19s0014g04670
N
0.914
Ca_06936
Cicer arietinum
Ca_06936
N
0.914
Ca_19891
Cicer arietinum
Ca_19891
N
0.914
Cla003883
Citrullus lanatus
Cla003883
N
0.914
Pm011692
Prunus mume
Pm011692
N
0.914
27733.m000033
Ricinus communis
27733.m000033
N
0.914
cassava28105.m1
Manihot esculenta
cassava28105.m1
N
0.914
cassava36956.valid.m1
Manihot esculenta
cassava36956.valid.m1
N
0.914
Cucsa.059580
Cucumis sativus
Cucsa.059580
N
0.914
mgf001258m
Mimulus guttatus
mgf001258m
N
0.914
Bostr.19424s0583
Boechera stricta
Bostr.19424s0583
N
0.914
Cagra.0316s0001
Capsella grandiflora
Cagra.0316s0001
N
0.914
Carubv10013632m.g
Capsella rubella
Carubv10013632m.g
N
0.914
Ciclev10008228m.g
Citrus clementina
Ciclev10008228m.g
N
0.914
Eucgr.F03384
Eucalyptus grandis
Eucgr.F03384
N
0.914
evm.TU.supercontig_12.1
Carica papaya
evm.TU.supercontig_12.1
N
0.914
gene03259-v1.0-hybrid
Fragaria vesca
gene03259-v1.0-hybrid
N
0.914
Gorai.002G079200
Gossypium raimondii
Gorai.002G079200
N
0.914
Gorai.009G429100
Gossypium raimondii
Gorai.009G429100
N
0.914
Lus10038550.g
Linum usitatissimum
Lus10038550.g
N
0.914
MDP0000295440
Malus domestica
MDP0000295440
N
0.914
MDP0000296508
Malus domestica
MDP0000296508
N
0.914
SapurV1A.0694s0030
Salix purpurea
SapurV1A.0694s0030
N
0.914
Thhalv10020666m.g
Eutrema salsugineum
Thhalv10020666m.g
N
0.914
PK22680.1
Cannabis sativa
PK22680.1
N
0.914
BGIOSGA000686
Oryza indica
BGIOSGA000686
N
0.913
BGIOSGA017200
Oryza indica
BGIOSGA017200
N
0.913
BGIOSGA020126
Oryza indica
BGIOSGA020126
N
0.913
BGIOSGA020128
Oryza indica
BGIOSGA020128
N
0.913
F775_12027
Aegilops tauschii
F775_12027
N
0.913
F775_20405
Aegilops tauschii
F775_20405
N
0.913
GLYMA13G32320
Glycine max
GLYMA13G32320
N
0.913
GLYMA15G07010
Glycine max
GLYMA15G07010
N
0.913
GRMZM2G004732
Zea mays
GRMZM2G004732
N
0.913
GRMZM2G155217
Zea mays
GRMZM2G155217
N
0.913
GRMZM2G313058
Zea mays
GRMZM2G313058
N
0.913
GRMZM2G440529
Zea mays
GRMZM2G440529
N
0.913
GSMUA_Achr10G04860_001
Musa acuminata
GSMUA_Achr10G04860_001
N
0.913
GSMUA_Achr11G18680_001
Musa acuminata
GSMUA_Achr11G18680_001
N
0.913
GSMUA_Achr4G33630_001
Musa acuminata
GSMUA_Achr4G33630_001
N
0.913
GSMUA_Achr5G26430_001
Musa acuminata
GSMUA_Achr5G26430_001
N
0.913
GSMUA_Achr9G12100_001
Musa acuminata
GSMUA_Achr9G12100_001
N
0.913
GSMUA_Achr9G24670_001
Musa acuminata
GSMUA_Achr9G24670_001
N
0.913
LPERR01G28830
Leersia perrieri
LPERR01G28830
N
0.913
MLOC_37666
Hordeum vulgare
MLOC_37666
N
0.913
MLOC_72940
Hordeum vulgare
MLOC_72940
N
0.913
MTR_2g011070
Medicago truncatula
MTR_2g011070
N
0.913
OB04G33270
Oryza brachyantha
OB04G33270
N
0.913
OB05G29420
Oryza brachyantha
OB05G29420
N
0.913
OB08G14900
Oryza brachyantha
OB08G14900
N
0.913
OBART01G33360
Oryza barthii
OBART01G33360
N
0.913
OBART04G24870
Oryza barthii
OBART04G24870
N
0.913
OBART05G21860
Oryza barthii
OBART05G21860
N
0.913
OGLUM01G37590
Oryza glumaepatula
OGLUM01G37590
N
0.913
OGLUM04G26290
Oryza glumaepatula
OGLUM04G26290
N
0.913
OGLUM05G23050
Oryza glumaepatula
OGLUM05G23050
N
0.913
OLONG_006510
Oryza longistaminata
OLONG_006510
N
0.913
OLONG_026655
Oryza longistaminata
OLONG_026655
N
0.913
OMERI01G30260
Oryza meridionalis
OMERI01G30260
N
0.913
OMERI04G21930
Oryza meridionalis
OMERI04G21930
N
0.913
OMERI12G12400
Oryza meridionalis
OMERI12G12400
N
0.913
ONIVA01G38120
Oryza nivara
ONIVA01G38120
N
0.913
ONIVA03G13290
Oryza nivara
ONIVA03G13290
N
0.913
ONIVA05G22530
Oryza nivara
ONIVA05G22530
N
0.913
OPUNC01G32440
Oryza punctata
OPUNC01G32440
N
0.913
OPUNC04G23980
Oryza punctata
OPUNC04G23980
N
0.913
ORGLA04G0213700
Oryza glaberrima
ORGLA04G0213700
N
0.913
ORGLA05G0190400
Oryza glaberrima
ORGLA05G0190400
N
0.913
ORUFI01G36520
Oryza rufipogon
ORUFI01G36520
N
0.913
ORUFI05G23130
Oryza rufipogon
ORUFI05G23130
N
0.913
ORUFI06G19010
Oryza rufipogon
ORUFI06G19010
N
0.913
OS04G0631600
Oryza sativa
OS04G0631600
N
0.913
PGSC0003DMG400013875
Solanum tuberosum
PGSC0003DMG400013875
N
0.913
POPTR_0004s02870
Populus trichocarpa
POPTR_0004s02870
N
0.913
POPTR_0005s12150
Populus trichocarpa
POPTR_0005s12150
N
0.913
POPTR_0007s13360
Populus trichocarpa
POPTR_0007s13360
N
0.913
POPTR_0011s03560
Populus trichocarpa
POPTR_0011s03560
N
0.913
PRUPE_ppa005924mg
Prunus persica
PRUPE_ppa005924mg
N
0.913
Sb03g036670
Sorghum bicolor
Sb03g036670
N
0.913
Sb07g004980
Sorghum bicolor
Sb07g004980
N
0.913
Sb09g024720
Sorghum bicolor
Sb09g024720
N
0.913
Si001796m.g
Setaria italica
Si001796m.g
N
0.913
Si010139m.g
Setaria italica
Si010139m.g
N
0.913
Si013853m.g
Setaria italica
Si013853m.g
N
0.913
Si022548m.g
Setaria italica
Si022548m.g
N
0.913
Solyc02g079760.2
Solanum lycopersicum
Solyc02g079760.2
N
0.913
Solyc03g031450.2
Solanum lycopersicum
Solyc03g031450.2
N
0.913
TCM_030051
Theobroma cacao
TCM_030051
N
0.913
Traes_2AL_70AE1B8B8
Triticum aestivum
Traes_2AL_70AE1B8B8
N
0.913
Traes_2BL_A014BCC51
Triticum aestivum
Traes_2BL_A014BCC51
N
0.913
Traes_2BL_E82F7902D
Triticum aestivum
Traes_2BL_E82F7902D
N
0.913
Traes_2DL_DCD7B13A8
Triticum aestivum
Traes_2DL_DCD7B13A8
N
0.913
TRIUR3_00968
Triticum urartu
TRIUR3_00968
N
0.913
VIT_00s0274g00070
Vitis vinifera
VIT_00s0274g00070
N
0.913
VIT_04s0023g02410
Vitis vinifera
VIT_04s0023g02410
N
0.913
Ca_00214
Cicer arietinum
Ca_00214
N
0.913
Pm009855
Prunus mume
Pm009855
N
0.913
29842.m003704
Ricinus communis
29842.m003704
N
0.913
cassava13240.valid.m1
Manihot esculenta
cassava13240.valid.m1
N
0.913
cassava19346.valid.m1
Manihot esculenta
cassava19346.valid.m1
N
0.913
mgf008488m
Mimulus guttatus
mgf008488m
N
0.913
mgf016565m
Mimulus guttatus
mgf016565m
N
0.913
Aquca_028_00271
Aquilegia coerulea
Aquca_028_00271
N
0.913
Ciclev10015039m.g
Citrus clementina
Ciclev10015039m.g
N
0.913
Eucgr.E03614
Eucalyptus grandis
Eucgr.E03614
N
0.913
evm.TU.supercontig_27.162
Carica papaya
evm.TU.supercontig_27.162
N
0.913
gene30665-v1.0-hybrid
Fragaria vesca
gene30665-v1.0-hybrid
N
0.913
Gorai.006G085000
Gossypium raimondii
Gorai.006G085000
N
0.913
Gorai.009G175300
Gossypium raimondii
Gorai.009G175300
N
0.913
Gorai.010G147100
Gossypium raimondii
Gorai.010G147100
N
0.913
Gorai.011G020100
Gossypium raimondii
Gorai.011G020100
N
0.913
Lus10007613.g
Linum usitatissimum
Lus10007613.g
N
0.913
Lus10018400.g
Linum usitatissimum
Lus10018400.g
N
0.913
Lus10025987.g
Linum usitatissimum
Lus10025987.g
N
0.913
MDP0000301999
Malus domestica
MDP0000301999
N
0.913
orange1.1g011373m.g
Citrus sinensis
orange1.1g011373m.g
N
0.913
Pavir.Ea03112
Panicum virgatum
Pavir.Ea03112
N
0.913
Pavir.Eb03429
Panicum virgatum
Pavir.Eb03429
N
0.913
Pavir.Ga00384
Panicum virgatum
Pavir.Ga00384
N
0.913
Pavir.J10443
Panicum virgatum
Pavir.J10443
N
0.913
Pavir.J13928
Panicum virgatum
Pavir.J13928
N
0.913
Pavir.J25904
Panicum virgatum
Pavir.J25904
N
0.913
SapurV1A.0028s0510
Salix purpurea
SapurV1A.0028s0510
N
0.913
SapurV1A.0441s0120
Salix purpurea
SapurV1A.0441s0120
N
0.913
SapurV1A.1304s0050
Salix purpurea
SapurV1A.1304s0050
N
0.913
PK14284.1
Cannabis sativa
PK14284.1
N
0.913
LjSGA_014369.1
Lotus japonicus
LjSGA_014369.1
N
0.913
PDK_20s1457351g001
Phoenix dactylifera
PDK_20s1457351g001
N
0.913
Cucsa.125970
Cucumis sativus
Cucsa.125970
N
0.910
Bra035761
Brassica rapa
Bra035761
N
0.902
GLYMA16G24661
Glycine max
GLYMA16G24661
N
0.901
cassava21180.m1
Manihot esculenta
cassava21180.m1
N
0.893
SapurV1A.0658s0070
Salix purpurea
SapurV1A.0658s0070
N
0.890
SapurV1A.2213s0020
Salix purpurea
SapurV1A.2213s0020
N
0.890
BHLH110
Arabidopsis thaliana
AT1G27660
N
0.889
fgenesh2_kg.1__2924__AT1G27660.1
Arabidopsis lyrata
fgenesh2_kg.1__2924__AT1G27660.1
N
0.889
GSMUA_Achr6G24280_001
Musa acuminata
GSMUA_Achr6G24280_001
N
0.889
MLOC_57076
Hordeum vulgare
MLOC_57076
N
0.889
MTR_3g112170
Medicago truncatula
MTR_3g112170
N
0.889
OLONG_021979
Oryza longistaminata
OLONG_021979
N
0.889
OPUNC01G00360
Oryza punctata
OPUNC01G00360
N
0.889
PGSC0003DMG400003746
Solanum tuberosum
PGSC0003DMG400003746
N
0.889
POPTR_0002s03380
Populus trichocarpa
POPTR_0002s03380
N
0.889
POPTR_0005s25240
Populus trichocarpa
POPTR_0005s25240
N
0.889
PRUPE_ppa005486mg
Prunus persica
PRUPE_ppa005486mg
N
0.889
Sb03g008830
Sorghum bicolor
Sb03g008830
N
0.889
Solyc02g084880.2
Solanum lycopersicum
Solyc02g084880.2
N
0.889
Solyc04g080710.2
Solanum lycopersicum
Solyc04g080710.2
N
0.889
TCM_034098
Theobroma cacao
TCM_034098
N
0.889
VIT_18s0001g12970
Vitis vinifera
VIT_18s0001g12970
N
0.889
Ca_04928
Cicer arietinum
Ca_04928
N
0.889
Cla021101
Citrullus lanatus
Cla021101
N
0.889
Pm005865
Prunus mume
Pm005865
N
0.889
30170.m014085
Ricinus communis
30170.m014085
N
0.889
cassava42530.valid.m1
Manihot esculenta
cassava42530.valid.m1
N
0.889
Cucsa.342640
Cucumis sativus
Cucsa.342640
N
0.889
Cucsa.359290
Cucumis sativus
Cucsa.359290
N
0.889
mgf013138m
Mimulus guttatus
mgf013138m
N
0.889
Aquca_010_00556
Aquilegia coerulea
Aquca_010_00556
N
0.889
Ciclev10001291m.g
Citrus clementina
Ciclev10001291m.g
N
0.889
evm.TU.supercontig_99.32
Carica papaya
evm.TU.supercontig_99.32
N
0.889
gene11847-v1.0-hybrid
Fragaria vesca
gene11847-v1.0-hybrid
N
0.889
Gorai.009G199600
Gossypium raimondii
Gorai.009G199600
N
0.889
MDP0000168695
Malus domestica
MDP0000168695
N
0.889
MDP0000262020
Malus domestica
MDP0000262020
N
0.889
MDP0000687814
Malus domestica
MDP0000687814
N
0.889
orange1.1g035657m.g
Citrus sinensis
orange1.1g035657m.g
N
0.889
SapurV1A.0006s0290
Salix purpurea
SapurV1A.0006s0290
N
0.889
SapurV1A.0188s0290
Salix purpurea
SapurV1A.0188s0290
N
0.889
PDK_20s1709901g001
Phoenix dactylifera
PDK_20s1709901g001
N
0.889
LjSGA_021413.2
Lotus japonicus
LjSGA_021413.2
N
0.887
POPTR_0013s13050
Populus trichocarpa
POPTR_0013s13050
N
0.882
POPTR_0019s12530
Populus trichocarpa
POPTR_0019s12530
N
0.882
PRUPE_ppa012528mg
Prunus persica
PRUPE_ppa012528mg
N
0.882
TCM_019871
Theobroma cacao
TCM_019871
N
0.882
Pm007388
Prunus mume
Pm007388
N
0.882
28405.m000015
Ricinus communis
28405.m000015
N
0.882
cassava36740.valid.m1
Manihot esculenta
cassava36740.valid.m1
N
0.882
cassava37772.valid.m1
Manihot esculenta
cassava37772.valid.m1
N
0.882
cassava37773.valid.m1
Manihot esculenta
cassava37773.valid.m1
N
0.882
SapurV1A.0388s0180
Salix purpurea
SapurV1A.0388s0180
N
0.882
Al_scaffold_0006_3588
Arabidopsis lyrata
Al_scaffold_0006_3588
N
0.878
AT4G05170
Arabidopsis thaliana
AT4G05170
N
0.878
Bostr.2983s0058
Boechera stricta
Bostr.2983s0058
N
0.878
Cagra.1981s0012
Capsella grandiflora
Cagra.1981s0012
N
0.878
Carubv10003683m.g
Capsella rubella
Carubv10003683m.g
N
0.878
Thhalv10029319m.g
Eutrema salsugineum
Thhalv10029319m.g
N
0.878
BHLH112
Arabidopsis thaliana
AT1G61660
N
0.875
Bo1g098400
Brassica oleracea
Bo1g098400
N
0.875
Bo9g041010
Brassica oleracea
Bo9g041010
N
0.875
Bra027080
Brassica rapa
Bra027080
N
0.875
Bra031413
Brassica rapa
Bra031413
N
0.875
fgenesh2_kg.2__291__AT1G61660.1
Arabidopsis lyrata
fgenesh2_kg.2__291__AT1G61660.1
N
0.875
Bostr.10040s0018
Boechera stricta
Bostr.10040s0018
N
0.875
Cagra.2507s0001
Capsella grandiflora
Cagra.2507s0001
N
0.875
Carubv10020420m.g
Capsella rubella
Carubv10020420m.g
N
0.875
Thhalv10023487m.g
Eutrema salsugineum
Thhalv10023487m.g
N
0.875
BHLH103
Arabidopsis thaliana
AT4G21340
N
0.868
Bo1g024090
Brassica oleracea
Bo1g024090
N
0.868
Bra013520
Brassica rapa
Bra013520
N
0.868
Bostr.10689s0083
Boechera stricta
Bostr.10689s0083
N
0.868
Bo9g076250
Brassica oleracea
Bo9g076250
N
0.866
Bra029562
Brassica rapa
Bra029562
N
0.866
Eucgr.D00881
Eucalyptus grandis
Eucgr.D00881
N
0.866
Bo1g108770
Brassica oleracea
Bo1g108770
N
0.861
Bo1g108780
Brassica oleracea
Bo1g108780
N
0.861
Bra023939
Brassica rapa
Bra023939
N
0.861
VIT_05s0094g00480
Vitis vinifera
VIT_05s0094g00480
N
0.858
cassava33658.m1
Manihot esculenta
cassava33658.m1
N
0.858
Bostr.26675s0184
Boechera stricta
Bostr.26675s0184
N
0.858
chr5.CM0200.1030.nc
Lotus japonicus
chr5.CM0200.1030.nc
N
0.858
Cla011068
Citrullus lanatus
Cla011068
N
0.857
Cucsa.095280
Cucumis sativus
Cucsa.095280
N
0.857
Cagra.1062s0002
Capsella grandiflora
Cagra.1062s0002
N
0.857
Carubv10006994m.g
Capsella rubella
Carubv10006994m.g
N
0.857