CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000004591
(
Tarsius syrichta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTSYG00000004591
T112617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF550
M07772_2.00
Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping
0.819
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000004210
C2H2 ZF
192
214
YKCKQCGKGFNRKWYLVRHQRVH
ENSTSYP00000004210
C2H2 ZF
220
242
YECNACGKAFSQSSTLIRHYLIH
ENSTSYP00000004210
C2H2 ZF
248
270
YKCLECGKTFKRRSYLMQHHPIH
ENSTSYP00000004210
C2H2 ZF
276
298
YECNQCRKAFTHRSTFIRHNRTH
ENSTSYP00000004210
C2H2 ZF
304
326
FECKECEKAFSNRAHLIQHYIIH
ENSTSYP00000004210
C2H2 ZF
332
354
YDCMECGKAFRCSSELMQHQRIH
ENSTSYP00000004210
C2H2 ZF
360
382
YECTQCGKAFHRSTYLIQHSVIH
ENSTSYP00000004210
C2H2 ZF
388
410
YKCIECGKAFKRRSHLLQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Tarsius syrichta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004910
Ailuropoda melanoleuca
ENSAMEG00000004910
I
0.822
ZNF550
Canis familiaris
ENSCAFG00000002421
I
0.822
ZNF550
Callithrix jacchus
ENSCJAG00000000044
I
0.821
ENSCSAG00000001629
Chlorocebus sabaeus
ENSCSAG00000001629
I
0.819
ZNF550
Homo sapiens
ENSG00000251369
D
0.819
ZNF550
Gorilla gorilla
ENSGGOG00000014068
I
0.819
ZNF550
Macaca mulatta
ENSMMUG00000006122
I
0.819
ENSNLEG00000010977
Nomascus leucogenys
ENSNLEG00000010977
I
0.819
ZNF550
Pan troglodytes
ENSPTRG00000011560
I
0.819
ENSMMUP00000031401
Macaca fascicularis
ENSMMUP00000031401
I
0.819
ENSMPUG00000006298
Mustela putorius furo
ENSMPUG00000006298
I
0.812
ZNF550
Tursiops truncatus
ENSTTRG00000000293
I
0.801
ENSOARG00000003673
Ovis aries
ENSOARG00000003673
I
0.784