CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0072490
(
Schistosoma japonicum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sjc_0072490
T145041_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000006817
C2H2 ZF
386
410
FKCPVYNCQMSFYSRFNQMEHIRTH
CPRT0000006817
C2H2 ZF
416
440
FTCPEPQCTATFKRRRDLRDHWSMH
CPRT0000006817
C2H2 ZF
534
558
YHCTYPGCDKSYARRHRLNQHISTH
CPRT0000006817
C2H2 ZF
564
588
IPCDAPNCNARYFSEDDLRRHKLSH
CPRT0000006817
C2H2 ZF
600
624
HACTYPGCGKAYSKLNKLKEHLRSH
CPRT0000006817
C2H2 ZF
630
654
YVCREPGCGAAFIRLYGVKRHELTH
CPRT0000006817
C2H2 ZF
766
790
HICPFKECGKAFPKLNKLREHICRH
CPRT0000006817
C2H2 ZF
796
818
FVCDKCKASFVRMYDLRRHSNIH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma japonicum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SROB_0001653601
Schistosoma rodhaini
SROB_0001653601
N
0.792
A_02028
Schistosoma haematobium
A_02028
N
0.790
SCUD_0002066701
Schistosoma curassoni
SCUD_0002066701
N
0.790
SMRZ_0001314001
Schistosoma margrebowiei
SMRZ_0001314001
N
0.790
SMTD_0002129401
Schistosoma mattheei
SMTD_0002129401
N
0.790