CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0002129401
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0002129401
T156400_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0002129401-mRNA-1
C2H2 ZF
71
95
FKCPMVNCQMSFHSRFNQMEHIRTH
SMTD_0002129401-mRNA-1
C2H2 ZF
101
125
FTCPEPHCTSTFKRRRDLRDHWSMH
SMTD_0002129401-mRNA-1
C2H2 ZF
219
243
YHCTYPGCDKSYARRHRLNQHISTH
SMTD_0002129401-mRNA-1
C2H2 ZF
249
273
IPCDAPNCNVRYFSEEDLKRHKLSH
SMTD_0002129401-mRNA-1
C2H2 ZF
285
309
HACTYAGCGKAYSKLNKLKEHLRSH
SMTD_0002129401-mRNA-1
C2H2 ZF
315
339
YVCREPGCGAAFIRLYGVKRHELTH
SMTD_0002129401-mRNA-1
C2H2 ZF
439
463
HICPFKECGKAFPKLNKLREHICRH
SMTD_0002129401-mRNA-1
C2H2 ZF
469
491
FVCDQCKASFVRMYDLRRHSNIH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_02028
Schistosoma haematobium
A_02028
N
0.827
SCUD_0002066701
Schistosoma curassoni
SCUD_0002066701
N
0.827
SMRZ_0001314001
Schistosoma margrebowiei
SMRZ_0001314001
N
0.827
SROB_0001653601
Schistosoma rodhaini
SROB_0001653601
N
0.825
Sjc_0072490
Schistosoma japonicum
Sjc_0072490
N
0.790