CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0001314001
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0001314001
T156292_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0001314001-mRNA-1
C2H2 ZF
225
249
FKCPMVNCQMSFHSRFNQMEHIRTH
SMRZ_0001314001-mRNA-1
C2H2 ZF
255
279
FTCPEPHCTSTFKRRRDLRDHWSMH
SMRZ_0001314001-mRNA-1
C2H2 ZF
371
395
YHCTYPGCDKSYARRHRLNQHISTH
SMRZ_0001314001-mRNA-1
C2H2 ZF
401
425
IPCDAPNCNVRYFSEEDLKRHKLSH
SMRZ_0001314001-mRNA-1
C2H2 ZF
437
461
HACTYAGCGKAYSKLNKLKEHLRSH
SMRZ_0001314001-mRNA-1
C2H2 ZF
467
491
YVCREPGCGAAFIRLYGVKRHELTH
SMRZ_0001314001-mRNA-1
C2H2 ZF
591
615
HICPFKECGKAFPKLNKLREHICRH
SMRZ_0001314001-mRNA-1
C2H2 ZF
621
643
FVCDQCKASFVRMYDLRRHSNIH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_02028
Schistosoma haematobium
A_02028
N
0.827
SCUD_0002066701
Schistosoma curassoni
SCUD_0002066701
N
0.827
SMTD_0002129401
Schistosoma mattheei
SMTD_0002129401
N
0.827
SROB_0001653601
Schistosoma rodhaini
SROB_0001653601
N
0.825
Sjc_0072490
Schistosoma japonicum
Sjc_0072490
N
0.790